Abstract

Abstract

Abstract
Robust quantification of animal behavior is fundamental in experimental neuroscience research. Systems providing automated behavioral assessment are an important alternative to manual measurements avoiding problems such as human bias, low reproducibility and high cost. Integrating these tools with closed-loop control systems creates conditions to correlate environment and behavioral expressions effectively, and ultimately explain the neural foundations of behavior. We present an integrated solution for automated behavioral analysis of rodents using deep learning networks on video streams acquired from a depth-sensing camera. The use of depth sensors has notable advantages: tracking/classification performance is improved and independent of animals' coat color, and videos can be recorded in dark conditions without affecting animals' natural behavior. Convolutional and recurrent layers were combined in deep network architectures, and both spatial and temporal representations were successfully learned for a 4-classes behavior classification task (standstill, walking, rearing and grooming). Integration with Arduino microcontrollers creates an easy-to-use control platform providing low-latency feedback signals based on the deep learning automatic classification of animal behavior. The complete system, combining depth-sensor camera, computer, and Arduino microcontroller, allows simple mapping of input-output control signals using the animal's current behavior and position. For example, a feeder can be controlled not by pressing a lever but by the animal behavior itself. An integrated graphical user interface completes a user-friendly and cost-effective solution for animal tracking and behavior classification. This open-software/open-hardware platform can boost the development of customized protocols for automated behavioral research, and support ever more sophisticated, reliable and reproducible behavioral neuroscience experiments.

Abstract
Abstract The increasing popularity of attention mechanisms in deep learning algorithms for computer vision and natural language processing made these models attractive to other research domains. In healthcare, there is a strong need for tools that may improve the routines of the clinicians and the patients. Naturally, the use of attention-based algorithms for medical applications occurred smoothly. However, being healthcare a domain that depends on high-stake decisions, the scientific community must ponder if these high-performing algorithms fit the needs of medical applications. With this motto, this paper extensively reviews the use of attention mechanisms in machine learning (including Transformers) for several medical applications. This work distinguishes itself from its predecessors by proposing a critical analysis of the claims and potentialities of attention mechanisms presented in the literature through an experimental case study on medical image classification with three different use cases. These experiments focus on the integrating process of attention mechanisms into established deep learning architectures, the analysis of their predictive power, and a visual assessment of their saliency maps generated by post-hoc explanation methods. This paper concludes with a critical analysis of the claims and potentialities presented in the literature about attention mechanisms and proposes future research lines in medical applications that may benefit from these frameworks.

Abstract
The still prevalent use of paper conformity lists in the automotive industry has a serious negative impact on the performance of quality control inspectors. We propose instead a hybrid quality inspection system, where we combine automated detection with human feedback, to increase worker performance by reducing mental and physical fatigue, and the adaptability and responsiveness of the assembly line to change. The system integrates the hierarchical automatic detection of the non-conforming vehicle parts and information visualization on a wearable device to present the results to the factory worker and obtain human confirmation. Besides designing a novel 3D vehicle generator to create a digital representation of the non conformity list and to collect automatically annotated training data, we apply and aggregate in a novel way state-of-the-art domain adaptation and pseudo labeling methods to our real application scenario, in order to bridge the gap between the labeled data generated by the vehicle generator and the real unlabeled data collected on the factory floor. This methodology allows us to obtain, without any manual annotation of the real dataset, an example-based F1 score of 0.565 in an unconstrained scenario and 0.601 in a fixed camera setup (improvements of 11 and 14.6 percentage points, respectively, over a baseline trained with purely simulated data). Feedback obtained from factory workers highlighted the usefulness of the proposed solution, and showed that a truly hybrid assembly line, where machine and human work in symbiosis, increases both efficiency and accuracy in automotive quality control.

Abstract
The automation of interictal epileptiform discharges through deep learning models can increase assertiveness and reduce the time spent on epilepsy diagnosis, making the process faster and more reliable. It was demonstrated that deep sequence networks can be a useful type of algorithm to effectively detect IEDs. Several different deep networks were tested, of which the best three architectures reached average AUC values of 0.96, 0.95 and 0.94, with convergence of test specificity and sensitivity values around 90%, which indicates a good ability to detect IED samples in EEG records.