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Publications

Publications by CTM

2021

Hidden Markov models on a self-organizing map for anomaly detection in 802.11 wireless networks

Authors
Allahdadi, A; Pernes, D; Cardoso, JS; Morla, R;

Publication
NEURAL COMPUTING & APPLICATIONS

Abstract
The present work introduces a hybrid integration of the self-organizing map and the hidden Markov model (HMM) for anomaly detection in 802.11 wireless networks. The self-organizing hidden Markov model map (SOHMMM) deals with the spatial connections of HMMs, along with the inherent temporal dependencies of data sequences. In essence, an HMM is associated with each neuron of the SOHMMM lattice. In this paper, the SOHMMM algorithm is employed for anomaly detection in 802.11 wireless access point usage data. Furthermore, we extend the SOHMMM online gradient descent unsupervised learning algorithm for multivariate Gaussian emissions. The experimental analysis uses two types of data: synthetic data to investigate the accuracy and convergence of the SOHMMM algorithm and wireless simulation data to verify the significance and efficiency of the algorithm in anomaly detection. The sensitivity and specificity of the SOHMMM algorithm in anomaly detection are compared to two other approaches, namely HMM initialized with universal background model (HMM-UBM) and SOHMMM with zero neighborhood (Z-SOHMMM). The results from the wireless simulation experiments show that SOHMMM outperformed the aforementioned approaches in all the presented anomalous scenarios.

2021

An exploratory study of interpretability for face presentation attack detection

Authors
Sequeira, AF; Goncalves, T; Silva, W; Pinto, JR; Cardoso, JS;

Publication
IET BIOMETRICS

Abstract
Biometric recognition and presentation attack detection (PAD) methods strongly rely on deep learning algorithms. Though often more accurate, these models operate as complex black boxes. Interpretability tools are now being used to delve deeper into the operation of these methods, which is why this work advocates their integration in the PAD scenario. Building upon previous work, a face PAD model based on convolutional neural networks was implemented and evaluated both through traditional PAD metrics and with interpretability tools. An evaluation on the stability of the explanations obtained from testing models with attacks known and unknown in the learning step is made. To overcome the limitations of direct comparison, a suitable representation of the explanations is constructed to quantify how much two explanations differ from each other. From the point of view of interpretability, the results obtained in intra and inter class comparisons led to the conclusion that the presence of more attacks during training has a positive effect in the generalisation and robustness of the models. This is an exploratory study that confirms the urge to establish new approaches in biometrics that incorporate interpretability tools. Moreover, there is a need for methodologies to assess and compare the quality of explanations.

2021

Interpretability of Machine Intelligence in Medical Image Computing, and Topological Data Analysis and Its Applications for Medical Data - 4th International Workshop, iMIMIC 2021, and 1st International Workshop, TDA4MedicalData 2021, Held in Conjunction with MICCAI 2021, Strasbourg, France, September 27, 2021, Proceedings

Authors
Reyes, M; Abreu, PH; Cardoso, JS; Hajij, M; Zamzmi, G; Paul, R; Thakur, L;

Publication
iMIMIC/TDA4MedicalData@MICCAI

Abstract

2021

Evaluation of the impact of domain adaptation on segmentation of Multiple Sclerosis lesions in MRI

Authors
de Sousa, IM; Oliveira, Md; Lisboa Filho, PN; Santos Cardoso, Jd;

Publication
IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2021, Houston, TX, USA, December 9-12, 2021

Abstract
Multiple Sclerosis (MS) is a chronic and inflammatory disorder that causes degeneration of axons in brain white matter and spinal cord. Magnetic Resonance Imaging (MRI) is extensively used to identify MS lesions and evaluate the progression of the disease, but the manual identification and quantification of lesions are time consuming and error-prone tasks. Thus, automated Deep Learning methods, in special Convolutional Neural Networks (CNNs), are becoming popular to segment medical images. It has been noticed that the performance of those methods tends to decrease when applied to MRI acquired under different protocols. The aim of this work is to statistically evaluate the possible influence of domain adaptation during the training process of CNNs models for segmenting MS lesions in MRI. The segmentation models were tested on MRIs (FLAIR and T1) of 20 patients diagnosed with Multiple Sclerosis. The set of segmented images of each different model was compared statistically, through the metrics Dice Similarity Coefficient (DSC), Predictive Positive Value (PPV) and Absolute Volume Difference (AVD). The results indicate that the domain adapted training can improve the performance of automatic segmentation methods, by CNNs, and have great potential to be used in medical clinics in the future. © 2021 IEEE.

2021

Towards Privacy-preserving Explanations in Medical Image Analysis

Authors
Montenegro, H; Silva, W; Cardoso, JS;

Publication
CoRR

Abstract

2021

Topological Similarity Index and Loss Function for Blood Vessel Segmentation

Authors
Araújo, RJ; Cardoso, JS; Oliveira, HP;

Publication
CoRR

Abstract

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