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Publications

Publications by Aurélio Campilho

2008

Tracking of Arabidopsis thaliana root cells in time-lapse microscopy

Authors
Marcuzzo, M; Quelhas, P; Mendonca, AM; Campilho, A;

Publication
19TH INTERNATIONAL CONFERENCE ON PATTERN RECOGNITION, VOLS 1-6

Abstract
In vivo observation of cells in the Arabidopsis thaliana root, by time-lapse confocal microscopy, is central to biology research. The research herein described is based on large amount of image data, which must be analyzed to determine the location and state of individual cells. Automating the process of cell tracking is an important step to create tools which will facilitate the analysis of cells' evolution through time. Here we introduce a confocal tracking system designed in two stages. At the image acquisition stage, we track the area under analysis based on point-to-point correspondences and motion estimation. After image acquisition, we compute cell-to-cell correspondences through time. The final result is a temporal structured information about each cell.

2008

Watershed Framework to Region-based Image Segmentation

Authors
Monteiro, FC; Campilho, A;

Publication
19TH INTERNATIONAL CONFERENCE ON PATTERN RECOGNITION, VOLS 1-6

Abstract
This paper proposes a new framework to image segmentation which combines edge- and region-based information with spectral techniques through the morphological algorithm of watersheds. A pre-processing step is used to reduce the spatial resolution without losing important image information. An initial partitioning of the image into primitive regions is set by applying a rainfalling watershed algorithm on the image gradient magnitude. This initial partition is the input to a computationally efficient region segmentation process which produces the final segmentation. The latter process uses a region-based similarity graph representation of the image regions. The experimental results clearly demonstrate the effectiveness of the proposed approach to produce simpler segmentations and to compare favourably with state-of-the-art methods.

1994

A NEW SIMILARITY CRITERION FOR RETINAL IMAGE REGISTRATION

Authors
MENDONCA, AM; CAMPILHO, A; NUNES, JMR;

Publication
ICIP-94 - PROCEEDINGS, VOL III

Abstract

2000

Combining independent and unbiased classifiers using weighted average

Authors
Alexandre, LA; Campilho, AC; Kamel, M;

Publication
15TH INTERNATIONAL CONFERENCE ON PATTERN RECOGNITION, VOL 2, PROCEEDINGS: PATTERN RECOGNITION AND NEURAL NETWORKS

Abstract
In a classification problem, improved accuracy can be obtained in many situations by using the combination of several classifiers instead of a single one. In [10], the error reduction that can be obtained by combining unbiased classifiers with independent errors using a simple average, was derived. We present an extension of this result by finding the improvement obtained when combining classifiers using weighted average. We also prove that for unbiased classifiers with independent errors the best combination of N classifiers corresponds to a weighted average, where the combination coefficient of each classifier is equal to 1/N. This means that in these cases the simple average should be used. We present experiments illustrating our results.

2011

Automatic segmentation of chromatographic images for region of interest delineation

Authors
Mendonca, AM; Sousa, AV; Sa Miranda, MC; Campilho, AC;

Publication
MEDICAL IMAGING 2011: IMAGE PROCESSING

Abstract
This paper describes a segmentation method for automating the region of interest (ROI) delineation in chromatographic images, thus allowing the definition of the image area that contains the fundamental information for further processing while excluding the frame of the chromatographic plate that does not contain relevant data for disease identification. This is the first component of a screening tool for Fabry disease, which will be based on the automatic analysis of the chromatographic patterns extracted from the image ROI. Image segmentation is performed in two phases, where each individual pixel is finally considered as frame or ROI. In the first phase, an unsupervised learning method is used for classifying image pixels into three classes: frame, ROI or unknown. In the second phase, distance features are used for deciding which class the unknown pixels belong to. The segmentation result is post-processed using a sequence of morphological operators in order to obtain the final ROI rectangular area. The proposed methodology was successfully evaluated in a dataset of 41 chromatographic images.

2001

Biologically motivated model for encoding multiple object motions in primate visual cortex using sequences of natural images

Authors
Milanova, MG; Elmaghraby, AS; Wachowiak, MP; Campilho, A;

Publication
INTERNATIONAL CONFERENCE ON INFORMATION TECHNOLOGY: CODING AND COMPUTING, PROCEEDINGS

Abstract
In this paper, we examine the possibility that the spatiotemporal receptive field properties of visual cortical neurons can be understood in terms of a statistically efficient strategy for encoding natural time-varying images. It is believed that the sense of object motion and velocity are also related to these fields, as objects in natural scenes are represented by a sparse set of statistically independent components, such as edges. Currently, computational models of receptive fields consider only spatial components, and thus cannot account for time-varying sensory stimuli In this paper, a model based on independent components analysis and cellular neural networks is proposed. We describe an artificial neural network that attempts to accurately reconstruct its spatiotemporal input data while simultaneously reducing the statistical dependencies between its outputs, as advocated by the redundancy reduction principle. This approach extends existing models to incorporate temporal aspects of sequences of images of natural scenes.

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