2019
Authors
Matos, C; Cunha, A; Pereira, F; Gonçalves, A; Silva, E; Pereira, S; Bentes, I; Faria, D; Briga Sá, A;
Publication
URBAN SCIENCE
Abstract
The characterization of water and energy consumptions is essential in order to define strategies for their rational use. The way these resources are used in households is the path for efficient and rational management, interdependent from each other. It is believed that there are significant differences between the patterns of water and energy consumption in rural and urban areas, where influencing factors should also be identified. This article aims to provide some preliminary results of a research project named ENERWAT, with the main goal to characterize the relation between water and energy consumption at the end use level for urban and rural environments. One of the goals of the aforementioned project was the design, application, and results analysis of a survey, in order to find the main differences in the water and energy consumptions at the end use level and the factors that influence it in urban and rural households. A total of 245 households participated in the research during 2016 (110 urban dwellings and 135 rural), responding to questions on their family composition, dwellings characterization, water and energy consumption habits, and conservation behaviors of these resources. The project also includes the instrumentation and monitoring of dwellings in rural and urban environments to quantify the water consumption and related energy consumption. This stage is still in progress and includes in situ measurements of nine different households (four in rural and five in urban environments) during at least one year. In this article, some of the results obtained by the survey application and the in situ measurements are presented. Despite the large number of data and the associated complexity, it can be concluded that the joint analysis of the results allows identification of a connection between water and energy consumption, as well as a household’s consumption patterns.
2018
Authors
Machado, M; Aresta, G; Leitao, P; Carvalho, AS; Rodrigues, M; Ramos, I; Cunha, A; Campilho, A;
Publication
2018 1ST INTERNATIONAL CONFERENCE ON GRAPHICS AND INTERACTION (ICGI 2018)
Abstract
Lung cancer diagnosis is made by radiologists through nodule search in chest Computed Tomography (CT) scans. This task is known to be difficult and prone to errors that can lead to late diagnosis. Although Computer-Aided Diagnostic (CAD) systems are promising tools to be used in clinical practice, experienced radiologists continue to perform better diagnosis than CADs. This paper proposes a methodology for characterizing the radiologist's gaze during nodules search in chest CT scans. The main goals are to identify regions that attract the radiologists' attention, which can then be used for improving a lung CAD system, and to create a tool to assist radiologists during the search task. For that purpose, the methodology processes the radiologists' gaze and their mouse coordinates during the nodule search. The resulting data is then processed to obtain a 3D gaze path from which relevant attention studies can be derived. To better convey the found information, a reference model of the lung that eases the communication of the location of relevant anatomical/pathological findings is also proposed. The methodology is tested on a set of 24 real-practice gazes, recorded via an Eye tracker, from 3 radiologists.
2019
Authors
Ferreira, CA; Aresta, G; Cunha, A; Mendonca, AM; Campilho, A;
Publication
2019 6TH IEEE PORTUGUESE MEETING IN BIOENGINEERING (ENBENG)
Abstract
Lung cancer has an increasing preponderance in worldwide mortality, demanding for the development of efficient screening methods. With this in mind, a binary classification method using Lung-RADS (TM) guidelines to warn changes in the screening management is proposed. First, having into account the lack of public datasets for this task, the lung nodules in the LIDC-IDRI dataset were re-annotated to include a Lung-RADS (TM)-based referral label. Then, a wide residual network is used for automatically assessing lung nodules in 3D chest computed tomography exams. Unlike the standard malignancy prediction approaches, the proposed method avoids the need to segment and characterize lung nodules, and instead directly defines if a patient should be submitted for further lung cancer tests. The system achieves a nodule-wise accuracy of 0.87 +/- 0.02.
2019
Authors
Aresta, G; Jacobs, C; Araujo, T; Cunha, A; Ramos, I; Ginneken, BV; Campilho, A;
Publication
SCIENTIFIC REPORTS
Abstract
We propose iW-Net, a deep learning model that allows for both automatic and interactive segmentation of lung nodules in computed tomography images. iW-Net is composed of two blocks: the first one provides an automatic segmentation and the second one allows to correct it by analyzing 2 points introduced by the user in the nodule's boundary. For this purpose, a physics inspired weight map that takes the user input into account is proposed, which is used both as a feature map and in the system's loss function. Our approach is extensively evaluated on the public LIDC-IDRI dataset, where we achieve a state-of-the-art performance of 0.55 intersection over union vs the 0.59 inter-observer agreement. Also, we show that iW-Net allows to correct the segmentation of small nodules, essential for proper patient referral decision, as well as improve the segmentation of the challenging non-solid nodules and thus may be an important tool for increasing the early diagnosis of lung cancer.
2019
Authors
Gomes, S; Valerio, MT; Salgado, M; Oliveira, HP; Cunha, A;
Publication
CENTERIS2019--INTERNATIONAL CONFERENCE ON ENTERPRISE INFORMATION SYSTEMS/PROJMAN2019--INTERNATIONAL CONFERENCE ON PROJECT MANAGEMENT/HCIST2019--INTERNATIONAL CONFERENCE ON HEALTH AND SOCIAL CARE INFORMATION SYSTEMS AND TECHNOLOGIES
Abstract
Capsule endoscopy is becoming the major medical technique for the examination of the gastrointestinal tract, and the detection of small bowel lesions. With the growth of endoscopic capsules and the lack of an appropriate tracking system to allow the localization of lesions, the need to develop software-based techniques for the localisation of the capsule at any given frame is also increasing. With this in mind, and knowing the lack of availability of labelled endoscopic datasets, this work aims to develop a unsupervised method for homography estimation in video capsule endoscopy frames, to later be applied in capsule localisation systems. The pipeline is based on an unsupervised convolutional neural network, with a VGG Net architecture, that estimates the homography between two images. The overall error, using a synthetic dataset, was evaluated through the mean average corner error, which was 34 pixels, showing great promise for the real-life application of this technique, although there is still room for the improvement of its performance. (C) 2019 The Authors. Published by Elsevier B.V. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/) Peer-review under responsibility of the scientific committee of the CENTERIS -International Conference on ENTERprise Information Systems / ProjMAN - International Conference on Project MANagement / HCist - International Conference on Health and Social Care Information Systems and Technologies.
2019
Authors
Dias, C; Pinheiro, G; Cunha, A; Oliveira, HP;
Publication
PATTERN RECOGNITION AND IMAGE ANALYSIS, IBPRIA 2019, PT II
Abstract
Advances in genomics have driven to the recognition that tumours are populated by different minor subclones of malignant cells that control the way the tumour progresses. However, the spatial and temporal genomic heterogeneity of tumours has been a hurdle in clinical oncology. This is mainly because the standard methodology for genomic analysis is the biopsy, that besides being an invasive technique, it does not capture the entire tumour spatial state in a single exam. Radiographic medical imaging opens new opportunities for genomic analysis by providing full state visualisation of a tumour at a macroscopic level, in a non-invasive way. Having in mind that mutational testing of EGFR and KRAS is a routine in lung cancer treatment, it was studied whether clinical and imaging data are valuable for predicting EGFR and KRAS mutations in a cohort of NSCLC patients. A reliable predictive model was found for EGFR (AUC = 0.96) using both a Multi-layer Perceptron model and a Random Forest model but not for KRAS (AUC = 0.56). A feature importance analysis using Random Forest reported that the presence of emphysema and lung parenchymal features have the highest correlation with EGFR mutation status. This study opens new opportunities for radiogenomics on predicting molecular properties in a more readily available and non-invasive way. © 2019, Springer Nature Switzerland AG.
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