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Publications

Publications by Jaime Cardoso

2010

Hierarchical medical image annotation using SVM-based approaches

Authors
Amaral, IF; Coelho, F; Da Costa, JFP; Cardoso, JS;

Publication
Proceedings of the IEEE/EMBS Region 8 International Conference on Information Technology Applications in Biomedicine, ITAB

Abstract
Automatic image annotation or image classification can be an important step when searching for images from a database. Common approaches to medical image annotation with the Image Retrieval for Medical Applications (IRMA) code make poor or no use of its hierarchical nature, where different dense sampled pixel based information methods outperform global image descriptors. In this work we address the problem of hierarchical medical image annotation by building a Content Based Image Retrieval (CBIR) system aiming to explore the combination of three different methods using Support Vector Machines (SVMs): first we concatenate global image descriptors with an interest points Bag-of-Words (BoW) to build a feature vector; second, we perform an initial annotation of the data using two known methods, disregarding the hierarchy of the IRMA code, and a third that takes the hierarchy into consideration by classifying consecutively its instances; finally, we make use of pairwise majority voting between methods by simply summing strings in order to produce a final annotation. Our results show that although almost all fusion methods result in an improvement over standalone classifications, none clearly outperforms each other. Nevertheless, these are quite competitive when compared with related works using an identical database. © 2010 IEEE.

2005

SVMs applied to objective aesthetic evaluation of conservative breast cancer treatment

Authors
Cardoso, JS; da Costa, JFP; Cardoso, MJ;

Publication
Proceedings of the International Joint Conference on Neural Networks (IJCNN), Vols 1-5

Abstract
Cosmetic assessment or conservative breast cancer treatment plays a major role in the study of breast cancer techniques. Objective assessment methods are being preferred to overcome the drawbacks of subjective evaluation. In this paper a methodology for the objective assessment of conservative breast cancer treatment is proposed. The quantitative measures used in this research provide an objective way to calculate the overall cosmetic result. We report experiments using support vector machines to derive an optimal assessment rule. The results seem to indicate that it is possible to construct an algorithm for a complete objective classification of the aesthetic result of breast conservative treatment.

2007

A shortest path approach for staff line detection

Authors
Rebelo, A; Capela, A; Pinto da Costa, JF; Guedes, C; Carrapatoso, E; Cardoso, JS;

Publication
AXMEDIS 2007: THIRD INTERNATIONAL CONFERENCE ON AUTOMATED PRODUCTION OF CROSS MEDIA CONTENT FOR MULTI-CHANNEL DISTRIBUTION, PROCEEDINGS

Abstract
Many music works produced in the past still exist only as original manuscripts or as photocopies. Preserving them entails their digitalization and consequent accessibility in a digital format easy-to-manage. The manual process to carry out this task is very time consuming and error prone. Optical music recognition (OMR) is a form of structured document image analysis where music symbols are isolated and identified so that the music can be conveniently processed. While OMR systems perform well on printed scores, current methods for reading handwritten musical scores by computers remain far from ideal. One of the fundamental stages of this process is the staff line detection. In this paper a new method for the automatic detection of music stave lines based on a shortest path approach is presented. Lines with some curvature, discontinuities, and inclination are robustly detected. The proposed algorithm behaves favourably when compared experimentally with well-established algorithms.

2007

Matched filtering and parameter estimation of ringdown waveforms

Authors
Berti, E; Cardoso, J; Cardoso, V; Cavaglia, M;

Publication
PHYSICAL REVIEW D

Abstract
Using recent results from numerical relativity simulations of nonspinning binary black hole mergers, we revisit the problem of detecting ringdown waveforms and of estimating the source parameters, considering both LISA and Earth-based interferometers. We find that Advanced LIGO and EGO could detect intermediate-mass black holes of mass up to similar to 10(3)M(circle dot) out to a luminosity distance of a few Gpc. For typical multipolar energy distributions, we show that the single-mode ringdown templates presently used for ringdown searches in the LIGO data stream can produce a significant event loss (> 10% for all detectors in a large interval of black hole masses) and very large parameter estimation errors on the black hole's mass and spin. We estimate that more than similar to 10(6) templates would be needed for a single-stage multimode search. Therefore, we recommend a "two-stage" search to save on computational costs: single-mode templates can be used for detection, but multimode templates or Prony methods should be used to estimate parameters once a detection has been made. We update estimates of the critical signal-to-noise ratio required to test the hypothesis that two or more modes are present in the signal and to resolve their frequencies, showing that second-generation Earth-based detectors and LISA have the potential to perform no-hair tests.

2012

Long-term cosmetic changes after breast-conserving treatment of patients with stage I-II breast cancer and included in the EORTC 'boost versus no boost' trial

Authors
Immink, JM; Putter, H; Bartelink, H; Cardoso, JS; Cardoso, MJ; van der Hulst Vijgen, MHV; Noordijk, EM; Poortmans, PM; Rodenhuis, CC; Struikmans, H;

Publication
ANNALS OF ONCOLOGY

Abstract
In breast cancer treated with breast-conserving radiotherapy, the influence of the boost dose on cosmetic outcome after long-term follow-up is unknown. We included 348 patients participating in the EORTC 'boost versus no boost' mega trial with a minimum follow-up of 6 years. Digitalised pictures were analysed using specific software, enabling quantification of seven relative asymmetry features associated with different aspects of fibrosis. After 3 years, we noted a statistically significantly poorer outcome for the boost patients for six features compared with those of the no boost patients. Up to 9 years of follow-up, results continued to worsen in the same magnitude for the both patient groups. We noted the following determinants for poorer outcome: (i) boost treatment, (ii) larger excision volumes, (iii) younger age, (iv) tumours located in the central lower quadrants of the breast and (v) a boost dose administered with photons. A boost dose worsens the change in breast appearance in the first 3 years. Moreover, the development of fibrosis associated with whole-breast irradiation, as estimated with the relative asymmetry features, is an ongoing process until (at least) 9 years after irradiation.

2002

Aesthetic evaluation of conservative breast cancer treatment: trying to optimize results

Authors
Cardoso, MJ; Preto, J; Queiros, H; Garrido, V; Moura, AJ; Pinto de Sousa, J; Ayres de Campos, D; Cardoso, J;

Publication
EUROPEAN JOURNAL OF CANCER

Abstract

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