Cookies Policy
The website need some cookies and similar means to function. If you permit us, we will use those means to collect data on your visits for aggregated statistics to improve our service. Find out More
Accept Reject
  • Menu
Publications

Publications by Joaquim João Sousa

2019

Evaluation of machine learning techniques in vine leaves disease detection: A preliminary case study on flavescence dorée

Authors
Hruška, J; Adão, T; Pádua, L; Guimarães, N; Peres, E; Morais, R; Sousa, JJ;

Publication
International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences - ISPRS Archives

Abstract
Vine culture is influenced by many factors, such as the weather, soil or topography, which are triggers to phytosanitary issues. Among them are some diseases, that are responsible for major economic losses that can, however, be managed with timely interventions in the field, viable of leading to effective results by preventing damage propagation. While not all symptoms might present a visible evidence, hyperspectral sensors can tackle this aspect with their ability for measuring hundreds of continuously sparse bands that range beyond the eye-perceptible spectrum. Having such research line in mind in this work, a hyperspectral sensor was applied to analyse the spectral status of vine leaves samples, collected in three chronologically distinct campaigns, while costly and destructive laboratory methods were used to track Flavescence Dorée (FD) in the same samples, for a ground truth information. Regarding data processing, machine learning approaches were used, in which several classifiers were selected to detect FD in vine leaves hyperspectral images. The goal was to evaluate and find most suitable classifier for this task. © 2019 International Society for Photogrammetry and Remote Sensing.

2019

Multi-purpose chestnut clusters detection using deep learning: A preliminary approach

Authors
Adão, T; Pádua, L; Pinho, TM; Hruška, J; Sousa, A; Sousa, JJ; Morais, R; Peres, E;

Publication
International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences - ISPRS Archives

Abstract
In the early 1980's, the European chestnut tree (Castanea sativa, Mill.) assumed an important role in the Portuguese economy. Currently, the Trás-os-Montes region (Northeast of Portugal) concentrates the highest chestnuts production in Portugal, representing the major source of income in the region (€50M-€60M). The recognition of the quality of the Portuguese chestnut varieties has increasing the international demand for both industry and consumer-grade segments. As result, chestnut cultivation intensification has been witnessed, in such a way that widely disseminated monoculture practices are currently increasing environmental disaster risks. Depending on the dynamics of the location of interest, monocultures may lead to desertification and soil degradation even if it encompasses multiple causes and a whole range of consequences or impacts. In Trás-os-Montes, despite the strong increase in the cultivation area, phytosanitary problems, such as the chestnut ink disease (Phytophthora cinnamomi) and the chestnut blight (Cryphonectria parasitica), along with other threats, e.g. chestnut gall wasp (Dryocosmus kuriphilus) and nutritional deficiencies, are responsible for a significant decline of chestnut trees, with a real impact on production. The intensification of inappropriate agricultural practices also favours the onset of phytosanitary problems. Moreover, chestnut trees management and monitoring generally rely on in-field time-consuming and laborious observation campaigns. To mitigate the associated risks, it is crucial to establish an effective management and monitoring process to ensure crop cultivation sustainability, preventing at the same time risks of desertification and land degradation. Therefore, this study presents an automatic method that allows to perform chestnut clusters identification, a key-enabling task towards the achievement of important goals such as production estimation and multi-temporal crop evaluation. The proposed methodology consists in the use of Convolutional Neural Networks (CNNs) to classify and segment the chestnut fruits, considering a small dataset acquired based on digital terrestrial camera. © 2019 International Society for Photogrammetry and Remote Sensing.

2019

Post-fire forestry recovery monitoring using high-resolution multispectral imagery from unmanned aerial vehicles

Authors
Pádua, L; Adão, T; Guimarães, N; Sousa, A; Peres, E; Sousa, JJ;

Publication
International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences - ISPRS Archives

Abstract
In recent years unmanned aerial vehicles (UAVs) have been used in several applications and research studies related to environmental monitoring. The works performed have demonstrated the suitability of UAVs to be employed in different scenarios, taking advantage of its capacity to acquire high-resolution data from different sensing payloads, in a timely and flexible manner. In forestry ecosystems, UAVs can be used with accuracies comparable with traditional methods to retrieve different forest properties, to monitor forest disturbances and to support disaster monitoring in fire and post-fire scenarios. In this study an area recently affected by a wildfire was surveyed using two UAVs to acquire multi-spectral data and RGB imagery at different resolutions. By analysing the surveyed area, it was possible to detect trees, that were able to survive to the fire. By comparing the ground-truth data and the measurements estimated from the UAV-imagery, it was found a positive correlation between burned height and a high correlation for tree height. The mean NDVI value was extracted used to create a three classes map. Higher NDVI values were mostly located in trees that survived that were not/barely affected by the fire. The results achieved by this study reiterate the effectiveness of UAVs to be used as a timely, efficient and cost-effective data acquisition tool, helping for forestry management planning and for monitoring forest rehabilitation in post-fire scenarios. © 2019 International Society for Photogrammetry and Remote Sensing.

2019

Classification of an Agrosilvopastoral System Using RGB Imagery from an Unmanned Aerial Vehicle

Authors
Pádua, L; Guimarães, N; Adão, T; Marques, P; Peres, E; Sousa, AMR; Sousa, JJ;

Publication
Progress in Artificial Intelligence - 19th EPIA Conference on Artificial Intelligence, EPIA 2019, Vila Real, Portugal, September 3-6, 2019, Proceedings, Part I

Abstract
This paper explores the usage of unmanned aerial vehicles (UAVs) to acquire remotely sensed very high-resolution imagery for classification of an agrosilvopastoral system in a rural region of Portugal. Aerial data was obtained using a low-cost UAV, equipped with an RGB sensor. Acquired imagery undergone a photogrammetric processing pipeline to obtain different data products: an orthophoto mosaic, a canopy height model (CHM) and vegetation indices (VIs). A superpixel algorithm was then applied to the orthophoto mosaic, dividing the images into different objects. From each object, different features were obtained based in its maximum, mean, minimum and standard deviation. These features were extracted from the different data products: CHM, VIs, and color bands. Classification process – using random forest algorithm – classified objects into five different classes: trees, low vegetation, shrubland, bare soil and infrastructures. Feature importance obtained from the training model showed that CHM-driven features have more importance when comparing to those obtained from VIs or color bands. An overall classification accuracy of 86.4% was obtained. © Springer Nature Switzerland AG 2019.

2019

Digital Ampelographer: A CNN Based Preliminary Approach

Authors
Adão, T; Pinho, TM; Ferreira, A; Sousa, AMR; Pádua, L; Sousa, J; Sousa, JJ; Peres, E; Morais, R;

Publication
Progress in Artificial Intelligence - 19th EPIA Conference on Artificial Intelligence, EPIA 2019, Vila Real, Portugal, September 3-6, 2019, Proceedings, Part I

Abstract
Authenticity, traceability and certification are key to assure both quality and confidence to wine consumers and an added commercial value to farmers and winemakers. Grapevine variety stands out as one of the most relevant factors to be considered in wine identification within the whole wine sector value chain. Ampelography is the science responsible for grapevine varieties identification based on (i) in-situ visual inspection of grapevine mature leaves and (ii) on the ampelographer experience. Laboratorial analysis is a costly and time-consuming alternative. Both the lack of experienced professionals and context-induced error can severely hinder official regulatory authorities’ role and therefore bring about a significant impact in the value chain. The purpose of this paper is to assess deep learning potential to classify grapevine varieties through the ampelometric analysis of leaves. Three convolutional neural networks architectures performance are evaluated using a dataset composed of six different grapevine varieties leaves. This preliminary approach identified Xception architecture as very promising to classify grapevine varieties and therefore support a future autonomous tool that assists the wine sector stakeholders, particularly the official regulatory authorities. © Springer Nature Switzerland AG 2019.

2019

Grapevine Varieties Classification Using Machine Learning

Authors
Marques, P; Pádua, L; Adão, T; Hruska, J; Sousa, J; Peres, E; Sousa, JJ; Morais, R; Sousa, AMR;

Publication
Progress in Artificial Intelligence - 19th EPIA Conference on Artificial Intelligence, EPIA 2019, Vila Real, Portugal, September 3-6, 2019, Proceedings, Part I

Abstract
Viticulture has a major impact in the European economy and over the years the intensive grapevine production led to the proliferation of many varieties. Traditionally these varieties are manually catalogued in the field, which is a costly and slow process and being, in many cases, very challenging to classify even for an experienced ampelographer. This article presents a cost-effective and automatic method for grapevine varieties classification based on the analysis of the leaf’s images, taken with an RGB sensor. The proposed method is divided into three steps: (1) color and shape features extraction; (2) training and; (3) classification using Linear Discriminant Analysis. This approach was applied in 240 leaf images of three different grapevine varieties acquired from the Douro Valley region in Portugal and it was able to correctly classify 87% of the grapevine leaves. The proposed method showed very promising classification capabilities considering the challenges presented by the leaves which had many shape irregularities and, in many cases, high color similarities for the different varieties. The obtained results compared with manual procedure suggest that it can be used as an effective alternative to the manual procedure for grapevine classification based on leaf features. Since the proposed method requires a simple and low-cost setup it can be easily integrated on a portable system with real-time processing to assist technicians in the field or other staff without any special skills and used offline for batch classification. © Springer Nature Switzerland AG 2019.

  • 10
  • 23