Cookies Policy
The website need some cookies and similar means to function. If you permit us, we will use those means to collect data on your visits for aggregated statistics to improve our service. Find out More
Accept Reject
  • Menu
Publications

Publications by José Luís Santos

2023

Open Source Solutions for Vulnerability Assessment: A Comparative Analysis

Authors
Cruz, DB; Almeida, JR; Oliveira, JL;

Publication
IEEE ACCESS

Abstract
As software applications continue to become more complex and attractive to cyber-attackers, enhancing resilience against cyber threats becomes essential. Aiming to provide more robust solutions, different approaches were proposed for vulnerability detection in different stages of the application life-cycle. This article explores three main approaches to application security: Static Application Security Testing (SAST), Dynamic Application Security Testing (DAST), and Software Composition Analysis (SCA). The analysis conducted in this work is focused on open-source solutions while considering commercial solutions to show contrast in the approaches taken and to better illustrate the different options available. It proposes a baseline comparison model to help evaluate and select the best solutions, using comparison criteria that are based on community standards. This work also identifies future opportunities for application security, highlighting some of the key challenges that still need to be addressed in order to fully protect against emerging threats, and proposes a workflow that combines the identified tools to be used for vulnerability assessments.

2023

Streptomyces meridianus sp. nov. isolated from brackish water of the Tagus estuary in Alcochete, Portugal

Authors
dos Santos, JD; Klimek, D; Calusinska, M; Lobo da Cunha, A; Catita, J; Goncalves, H; Gonzalez, I; Reyes, F; Lage, OM;

Publication
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Abstract
An isolation effort focused on sporogenous Actinomycetota from the Tagus estuary in Alcochete, Portugal, yielded a novel actinomycetal strain, designated MTZ3.1T, which was subjected to a polyphasic taxonomic study. MTZ3.1T is characterised by morphology typical of members of the genus Streptomyces, with light beige coloured substrate mycelium, which does not release pigments to the culture medium and with helicoidal aerial hyphae that differentiate into spores with a light- grey colour. The phylogeny of MTZ3.1T, based on the full 16S rRNA gene sequence, indicated that its closest relatives were Streptomyces alkaliterrae OF1T (98.48 %), Streptomyces chumphonensis KK1-2T (98.41 %), Streptomyces albofaciens JCM 4342T (98.34 %), Streoptomyces paromomycinus NBRC 15454T (98.34 %) and Streptomyces chrestomyceticus NRBC 13444T (98.34 %). Moreover, average nucleotide identity (ANI), average amino acid identity (AAI) and digital DNA-DNA hybridisation (dDDH) are below the species cutoff values (ANI 67.70 and 68.35 %, AAI 77.06 and 76.71 % and dDDH 22.10 and 21.50 % for S. alkaliterrae OF1T and S. chumphonensis KK1-2T, respectively). Whole genome sequencing revealed that MTZ3.1T has a genome of 5 644 485 bp with a DNA G+C content of 71.29 mol% and 5044 coding sequences. Physiologically, MTZ3.1T is strictly aerobic, able to grow at 15-37 & DEG;C, optimally at 25 & DEG;C and between pH5 and 8 and showed high salinity tolerance, growing with 0-10 %(w/v) NaCl. Major cellular fatty acids are C15:0, iso-C15:0, anteiso-C15: 0 and iso- C16:0. Furthermore, it was able to utilise a variety of nitrogen and carbon sources. Antimicrobial screening indicated that MTZ3.1T has potent anti- Staphylococcus aureus activity. On the basis of the polyphasic data, MTZ3.1T is proposed to represent a novel species, Streptomyces meridianus sp. nov. (= CECT 30416T = DSM 114037T=LMG 32463T).

2024

Surface Plasmon Resonance Sensor Based on a Planar Waveguide with a Bimetallic Layer

Authors
Rodrigues, HJB; Cardoso, MP; Miranda, CC; Romeiro, AF; Giraldi, MTR; Silva, AO; Costa, JCWA; Santos, JL; Guerreiro, A;

Publication
2024 LATIN AMERICAN WORKSHOP ON OPTICAL FIBER SENSORS, LAWOFS 2024

Abstract
This paper presents the examination of a planar waveguide sensor featuring a bimetallic layer, revealing its potential applicability across both the visible and infrared spectrums. The bimetallic layer consists of adjacent gold and silver slabs positioned atop the waveguide's core. This arrangement demonstrates the activation of two distinct plasmon resonances, indicating promising prospects for multiparameter sensing applications.

  • 80
  • 80