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Publications

Publications by CRIIS

2018

Predicting the flowering date of Portuguese grapevine varieties using temperature-based phenological models: a multi-site approach

Authors
Pereira, MR; Ribeiro, H; Abreu, I; Eiras Dias, J; Mota, T; Cunha, M;

Publication
JOURNAL OF AGRICULTURAL SCIENCE

Abstract
Phenological models for predicting the grapevine flowering were tested using phenological data of 15 grape varieties collected between 1990 and 2014 in Vinhos Verdes and Lisbon Portuguese wine regions. Three models were tested: Spring Warming (Growing Degree Days - GDD model), Spring Warming modified using a triangular function - GDD triangular and UniFORC model, which considers an exponential response curve to temperature. Model estimation was performed using data on two grape varieties (Loureiro and Fernao Pires), present in both regions. Three dates were tested for the beginning of heat unit accumulation (t(0)( )date): budburst, 1 January and 1 September. The best overall date was budburst. Furthermore, for each model parameter, an intermediate range of values common for the studied regions was estimated and further optimized to obtain one model that could he used for a diverse range of grape varieties in both wine regions. External validation was performed using an independent data set from 13 grape varieties (seven red and six white), different from the two used in the estimation step. The results showed a high coefficient of determination (R-2 : 0.59-0.89), low Root Mean Square Error (RMSE: 3-7 days) and Mean Absolute Deviation (MAD: 2-6 days) between predicted and observed values. The UniFORC model overall performed slightly better than the two GDD models, presenting higher R-2 (0.75) and lower RMSE (4.55) and MAD (3.60). The developed phenological models presented good accuracy when applied to several varieties in different regions and can be used as a predictor tool of flowering date in Portugal.

2018

QPhenoMetrics: An open source software application to assess vegetation phenology metrics

Authors
Duarte, L; Teodoro, AC; Monteiro, AT; Cunha, M; Goncalves, H;

Publication
COMPUTERS AND ELECTRONICS IN AGRICULTURE

Abstract
Phenology is one of the most reliable indicators of vegetation dynamics. Assessing and monitoring the dynamics of phenology is relevant to support several decisions in order to improve the efficiency of several farming practices. An open source application QPhenoMetrics - implemented in QGIS software that estimates vegetation phenology metrics is presented, using Earth Observation Systems (EOS) based time-series of Normalized Difference Vegetation Index (NDVI) and Enhanced Vegetation Index (EVI) as proxies for phenology. QPhenoMetrics is characterized by freely-usable and updatable code, acceptance of satellite images or text formats, time-series analysis toolbox allowing the selection of region of interest with statistical quality assessment for Vegetation Indices (VI), and estimation of ensemble metrics. The application is structured in three components: (i) input data; (ii) pre-processing of the VI time-series and several fitting methods and (iii) computation of the phenological metrics. QPhenoMetrics produces a plot with the VI time-series and corresponding phenology metrics, and a spreadsheet is created with a list of NDVI or EVI values estimated using the selected fitting method. To evaluate the application, two main Portuguese crops, vineyards and maize, and MOD13 data from MODIS sensor during 2011-2012 were considered. QPhenoMetrics was validated with vineyard phenology observations (2007-2011). A comparative analysis with software products TimeSat and Spirits was also performed. It was concluded that QPhenoMetrics can be very useful for common users to extract phenology information for 16 daily MODIS data in HDF format, text files with NDVI/EVI data and ASCII files, through a simple and intuitive graphic interface. Furthermore, the user can evaluate the quality assessment of VI of the images used. QPhenoMetrics is an effective open source tool that in addition to being free, is readily modifiable by user according to the study requirements.

2018

Retrieval of Maize Leaf Area Index Using Hyperspectral and Multispectral Data

Authors
Mananze, S; Pocas, I; Cunha, M;

Publication
REMOTE SENSING

Abstract
Field spectra acquired from a handheld spectroradiometer and Sentinel-2 images spectra were used to investigate the applicability of hyperspectral and multispectral data in retrieving the maize leaf area index in low-input crop systems, with high spatial and intra-annual variability, and low yield, in southern Mozambique, during three years. Seventeen vegetation indices, comprising two and three band indices, and nine machine learning regression algorithms (MLRA) were tested for the statistical approach while five cost functions were tested in the look-up-table (LUT) inversion approach. The three band vegetation indices were selected, specifically the modified difference index (mDI(d: 725; 715; 565)) for the hyperspectral dataset and the modified simple ratio (mSR(c: 740; 705; 865)) for the multispectral dataset of field spectra and the three band spectral index (TBSIb: 665; 865; 783) for the Sentinel-2 dataset. The relevant vector machine was the selected MLRA for the two datasets of field spectra (multispectral and hyperspectral) while the support vector machine was selected for the Sentinel-2 data. When using the LUT inversion technique, the minimum contrast estimation and the Bhattacharyya divergence cost functions were the best performing. The vegetation indices outperformed the other two approaches, with the TBSIb as the most accurate index (RMSE = 0.35). At the field scale, spectral data from Sentinel-2 can accurately retrieve the maize leaf area index in the study area.

2018

Direct-DRRT*: A RRT improvement proposal

Authors
Coelho, FO; Carvalho, JP; Pinto, MF; Marcato, AL;

Publication
13th APCA International Conference on Control and Soft Computing, CONTROLO 2018 - Proceedings

Abstract
The present work aims at the development of a new heuristic approach named Direct-DRRT . This new algorithm is an improvement of the DRRT* method, which is the fusion between RRT * and DRRT. This improvement aims at the mobile robot autonomous planning considering less memory and computational time for a route design. The results show the efficiency of our approach compared to the other methods, presenting less processing time and a signification reduced number of nodes and paths. © 2018 IEEE.

2018

EKF and computer vision for mobile robot localization

Authors
Coelho, FO; Carvalho, JP; Pinto, MF; Marcato, AL;

Publication
13th APCA International Conference on Control and Soft Computing, CONTROLO 2018 - Proceedings

Abstract
The autonomous robotic system accurate localization is a challenging step in robot navigation field once the mobile device should avoid dangerous situations, such as unsafe conditions and collisions. In this context, the present paper proposes a localization method using the Extended Kalman Filter (EKF) to fuse the information coming from two different sensors (i.e. odometry and computer vision). The localization results present with known and unknown starting points and are tested in a simulated environment. © 2018 IEEE.

2018

EKF design for online trajectory prediction of a moving object detected onboard of a UAV

Authors
Pinto, MF; Coelho, FO; De Souza, JPC; Melo, AG; Marcato, ALM; Urdiales, C;

Publication
13th APCA International Conference on Control and Soft Computing, CONTROLO 2018 - Proceedings

Abstract
The applications with Unmanned Aerial Vehicles have increased in the last decades due to their economic and technical feasibility. Moreover, several tasks require online objects tracking as well as the object position knowledge in the real-world with algorithms execution onboard. An example of such task is the video surveillance with human activity recognition. In this paper, we propose a new approach using Extended Kalman Filter to estimate and to predict the object real-world coordinates. This research shows that the results were up to 30% better compared to the results without data processing. © 2018 IEEE.

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