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Publications

Publications by CRIIS

2021

Assessing the performance of different OBIA software approaches for mapping invasive alien plants along roads with remote sensing data

Authors
Lourenco, P; Teodoro, AC; Goncalves, JA; Honrado, JP; Cunha, M; Sillero, N;

Publication
INTERNATIONAL JOURNAL OF APPLIED EARTH OBSERVATION AND GEOINFORMATION

Abstract
Roads and roadsides provide dispersal channels for non-native invasive alien plants (IAP), many of which hold devastating impacts in the economy, human health, biodiversity and ecosystem functionality. Remote sensing is an essential tool for efficiently assessing and monitoring the dynamics of IAP along roads. In this study, we explore the potentialities of object based image analysis (OBIA) approach to map several invasive plant species along roads using very high spatial resolution imagery. We compared the performance of OBIA approaches implemented in one open source software (OTB/Monteverdi) against those available in two proprietary pro-grams (eCognition and ArcGIS). We analysed the images by two sequential processes. First, we obtained a land-cover map for 15 study sites by segmenting the images with the algorithms Mean Shift Segmentation (MSS) and Multiresolution Segmentation (MRS), and by classifying the segmented images with the algorithms Support Vector Machine (SVM), Nearest Neighbour Classifier (NNC) and Maximum Likelihood Classifier (MLC). We created a mask using the polygons classified as non-vegetation to crop the images of the 15 study sites. Second, we repeated the previous segmentation and classification steps over the 15 masked images of vegetated areas using the same algorithms. OTB/Monteverdi, with MSS and SVM algorithms, showed to be a good software for land-cover mapping (OA = 87.0%), as well as ArcGIS, with MSS and MLC algorithms (OA = 84.3%). However, these two programs, using the same segmentation algorithms, did not achieve good accuracy results when mapping IAP species (OA(OTB/Monteverdi) = 63.3%; OAA(cos = 45.7%). eCognition, with MRS and NNC algorithms, reached better classification results in both land-cover and IAP maps (OA(Land-cover )= 95.7%; OA(Invasive-plant )= 92.8%). 'Bare soil' and 'Road', and 'A. donax' were the classes with best and worst overall accuracy, respectively, when mapping land-cover classes in the three programs. 'Other trees' was the class with the most accurate and significant differences in the three programs when mapping IAP species. The separation of each invasive species should be improved with a phenology-based design of field surveys. This study demonstrates the effectiveness of sequential segmentation and classification of RS data for mapping and monitoring plant invasions along linear infrastructures, which allows to reduce the time, cost and hazard of extensive field campaigns along roadsides.

2021

A Framework for Multi-Dimensional Assessment of Wildfire Disturbance Severity from Remotely Sensed Ecosystem Functioning Attributes

Authors
Marcos, B; Goncalves, J; Alcaraz Segura, D; Cunha, M; Honrado, JP;

Publication
REMOTE SENSING

Abstract
Wildfire disturbances can cause modifications in different dimensions of ecosystem functioning, i.e., the flows of matter and energy. There is an increasing need for methods to assess such changes, as functional approaches offer advantages over those focused solely on structural or compositional attributes. In this regard, remote sensing can support indicators for estimating a wide variety of effects of fire on ecosystem functioning, beyond burn severity assessment. These indicators can be described using intra-annual metrics of quantity, seasonality, and timing, called Ecosystem Functioning Attributes (EFAs). Here, we propose a satellite-based framework to evaluate the impacts, at short to medium term (i.e., from the year of fire to the second year after), of wildfires on four dimensions of ecosystem functioning: (i) primary productivity, (ii) vegetation water content, (iii) albedo, and (iv) sensible heat. We illustrated our approach by comparing inter-annual anomalies in satellite-based EFAs in the northwest of the Iberian Peninsula, from 2000 to 2018. Random Forest models were used to assess the ability of EFAs to discriminate burned vs. unburned areas and to rank the predictive importance of EFAs. Together with effect sizes, this ranking was used to select a parsimonious set of indicators for analyzing the main effects of wildfire disturbances on ecosystem functioning, for both the whole study area (i.e., regional scale), as well as for four selected burned patches with different environmental conditions (i.e., local scale). With both high accuracies (area under the receiver operating characteristic curve (AUC) > 0.98) and effect sizes (Cohen's |d| > 0.8), we found important effects on all four dimensions, especially on primary productivity and sensible heat, with the best performance for quantity metrics. Different spatiotemporal patterns of wildfire severity across the selected burned patches for different dimensions further highlighted the importance of considering the multi-dimensional effects of wildfire disturbances on key aspects of ecosystem functioning at different timeframes, which allowed us to diagnose both abrupt and lagged effects. Finally, we discuss the applicability as well as the potential advantages of the proposed approach for more comprehensive assessments of fire severity.

2021

Comparing Hydric Erosion Soil Loss Models in Rainy Mountainous and Dry Flat Regions in Portugal

Authors
Duarte, L; Cunha, M; Teodoro, AC;

Publication
LAND

Abstract
Soil erosion is a severe and complex issue in the agriculture area. The main objective of this study was to assess the soil loss in two regions, testing different methodologies and combining different factors of the Revised Universal Soil Loss Equation (RUSLE) based on Geographical Information Systems (GIS). To provide the methodologies to other users, a GIS open-source application was developed. The RUSLE equation was applied with the variation of some factors that compose it, namely the slope length and slope steepness (LS) factor and practices factor (P), but also with the use of different sources of information. Eight different erosion models (M1 to M8) were applied to the two regions with different ecological conditions: Montalegre (rainy-mountainous) and Alentejo (dry-flat), both in Portugal, to compare them and to evaluate the soil loss for 3 potential erosion levels: 0-25, 25-50 and >50 ton/ha center dot year. Regarding the methodologies, in both regions the behavior is similar, indicating that the M5 and M6 methodologies can be more conservative than the others (M1, M2, M3, M4 and M8), which present very consistent values in all classes of soil loss and for both regions. All methodologies were implemented in a GIS application, which is free and available under QGIS software.

2021

Integrating Spectral and Textural Information for Monitoring the Growth of Pear Trees Using Optical Images from the UAV Platform

Authors
Guo, YH; Chen, SZ; Wu, ZF; Wang, SX; Bryant, CR; Senthilnath, J; Cunha, M; Fu, YSH;

Publication
REMOTE SENSING

Abstract
With the recent developments of unmanned aerial vehicle (UAV) remote sensing, it is possible to monitor the growth condition of trees with the high temporal and spatial resolutions of data. In this study, the daily high-throughput RGB images of pear trees were captured from a UAV platform. A new index was generated by integrating the spectral and textural information using the improved adaptive feature weighting method (IAFWM). The inter-relationships of the air climatic variables and the soil's physical properties (temperature, humidity and conductivity) were firstly assessed using principal component analysis (PCA). The climatic variables were selected to independently build a linear regression model with the new index when the cumulative variance explained reached 99.53%. The coefficient of determination (R-2) of humidity (R-2 = 0.120, p = 0.205) using linear regression analysis was the dominating influencing factor for the growth of the pear trees, among the air climatic variables tested. The humidity (%) in 40 cm depth of soil (R-2 = 0.642, p < 0.001) using a linear regression coefficient was the largest among climatic variables in the soil. The impact of climatic variables on the soil was commonly greater than those in the air, and the R-2 grew larger with the increasing depth of soil. The effects of the fluctuation of the soil-climatic variables on the pear trees' growth could be detected using the sliding window method (SWM), and the maximum absolute value of coefficients with the corresponding day of year (DOY) of air temperature, soil temperature, soil humidity, and soil conductivity were confirmed as 221, 227, 228, and 226 (DOY), respectively. Thus, the impact of the fluctuation of climatic variables on the growth of pear trees can last 14, 8, 7, and 9 days, respectively. Therefore, it is highly recommended that the adoption of the integrated new index to explore the long-time impact of climate on pears growth be undertaken.

2021

MODELING SPATIAL-TEMPORAL WINE YIELD BASED on LAND SURFACE TEMPERATURE, VEGETATION INDICES and GIS - The CASE of the DOURO WINE REGION

Authors
Moreira P.; Duarte L.; Cunha M.; Teodoro A.C.;

Publication
International Geoscience and Remote Sensing Symposium (IGARSS)

Abstract
This work aims to integrate Remote Sensing (RS) and cadastral data in QGIS software to perform the spatiotemporal mapping of Wine Yield (WY) cluster zones in the Douro region. Spatiotemporal modelling approach for prediction of wine yield was based on Normalized Difference Vegetation Index (NDVI), Land Surface Temperature (LST) and topographic data. The results showed that 74% (R2 = 0.744, n=128, p<0.000) WY interannual variability at administrative division could be explained by the developed model. This information allows establishing wine production region pattern which can improve the agronomic and economic efficiency of vineyard and winery operations.

2021

Assessing the Potential Use of Drainage from Open Soilless Production Systems: A Case Study from an Agronomic and Ecotoxicological Perspective

Authors
Santos, MG; Moreira, GS; Pereira, R; Carvalho, SP;

Publication
SSRN Electronic Journal

Abstract

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