Abstract
Due to the high variability in Hematoxylin and Eosin (H&E)-stained Whole Slide Images (WSIs), hidden stratification, and batch effects, generalizing beyond the training distribution is one of the main challenges in Deep Learning (DL) for Computational Pathology (CPath). But although DL depends on large volumes of diverse and annotated data, it is common to have a significant number of annotated samples from one or multiple source distributions, and another partially annotated or unlabeled dataset representing a target distribution for which we want to generalize, the so-called Domain Adaptation (DA). In this work, we focus on the task of generalizing from a single source distribution to a target domain. As it is still not clear which domain adaptation strategy is best suited for CPath, we evaluate three different DA strategies, namely FixMatch, CycleGAN, and a self-supervised feature extractor, and show that DA is still a challenge in CPath.

Abstract
Breast cancer locoregional treatment can cause significant and long-lasting alterations to a patient's body. As various surgical options may be available to a patient and considering the impact that the aesthetic outcome may have on the patient's self-esteem, it is critical for the patient to be adequately informed of the possible outcomes of each treatment when deciding on the treatment plan. With the purpose of simulating how a patient may look like after treatment, we propose a deep generative model to transfer asymmetries caused by treatment from post-operative breast patients into pre-operative images, taking advantage of the inherent symmetry of breast images. Furthermore, we disentangle asymmetries related with the breast shape from the nipple within the latent space of the network, enabling higher control over the alterations to the breasts. Finally, we show the proposed model's wide applicability in medical imaging, by applying it to generate counterfactual explanations for cardiomegaly and pleural effusion prediction in chest radiographs.

Abstract
Neonatal seizures represent a critical medical issue that requires prompt diagnosis and treatment. Typically, at-risk newborns undergo a Magnetic Resonance Imaging (MRI) brain assessment followed by continuous seizure monitoring using multichannel EEG. Visual analysis of multichannel electroencephalogram (EEG) recordings remains the standard modality for seizure detection; however, it is limited by fatigue and delayed seizure identification. Advances in machine and deep learning have led to the development of powerful neonatal seizure detection algorithms that may help address these limitations. Nevertheless, their performance remains relatively low and often disregards the non-stationary attributes of EEG signals, especially when learned from weakly labeled EEG data. In this context, the present paper proposes a novel deep-learning approach for neonatal seizure detection. The method employs rigorous preprocessing to reduce noise and artifacts, along with a recently developed time-frequency distribution (TFD) derived from a separable compact support kernel to capture the fast spectral changes associated with neonatal seizures. The high-resolution TFD diagrams are then converted into RGB images and used as inputs to a pre-trained ResNet-18 model. This is followed by the training of an attention-based multiple-instance learning (MIL) mechanism. The purpose is to perform a spatial time-frequency analysis that can highlight which channels exhibit seizure activity, thereby reducing the time required for secondary evaluation by a doctor. Additionally, per-instance learning (PIL) is performed to further validate the robustness of our TFD and methodology. Tested on the Helsinki public dataset, the PIL model achieved an area under the curve (AUC) of 96.8%, while the MIL model attained an average AUC of 94.1%, surpassing similar attention-based methods.

Abstract

Abstract
Virtual staining is a promising technique that uses deep generative models to recreate histological stains, providing a faster and more cost-effective alternative to traditional tissue chemical staining. Specifically for H&E-HER2 staining transfer, despite a rising trend in publications, the lack of sufficient public datasets has hindered progress in the topic. Additionally, it is currently unclear which model frameworks perform best for this particular task. In this paper, we introduce the HER2match dataset, the first publicly available dataset with the same breast cancer tissue sections stained with both H&E and HER2. Furthermore, we compare the performance of several Generative Adversarial Networks (GANs) and Diffusion Models (DMs), and implement a novel Brownian Bridge Diffusion Model for H&E-HER2 translation. Our findings indicate that, overall, GANs perform better than DMs, with only the BBDM achieving comparable results. Moreover, we emphasize the importance of data alignment, as all models trained on HER2match produced vastly improved visuals compared to the widely used consecutive-slide BCI dataset. This research provides a new high-quality dataset, improving both model training and evaluation. In addition, our comparison of frameworks offers valuable guidance for researchers working on the topic. © 2025 Elsevier B.V., All rights reserved.

Abstract
With the growing adoption of Deep Learning for imaging tasks in biometrics and healthcare, it becomes increasingly important to ensure privacy when using and sharing images of people. Several works enable privacy-preserving image sharing by anonymizing the images so that the corresponding individuals are no longer recognizable. Most works average images or their embeddings as an anonymization technique, relying on the assumption that the average operation is irreversible. Recently, cold diffusion models, based on the popular denoising diffusion probabilistic models, have succeeded in reversing deterministic transformations on images. In this work, we leverage cold diffusion to decompose superimposed images, empirically demonstrating that it is possible to obtain two or more identically-distributed images given their average. We propose novel sampling strategies for this task and show their efficacy on three datasets. Our findings highlight the risks of averaging images as an anonymization technique and argue for the use of alternative anonymization strategies.