2015
Authors
Faria, C; Silva, J; Campilho, A;
Publication
DISABILITY AND REHABILITATION-ASSISTIVE TECHNOLOGY
Abstract
Purpose: This paper presents the Rehab@home system, a tool specifically developed for helping neurological patients performing rehabilitation exercises at home, without the presence of a physiotherapist. It is centred on the rehabilitation of balance and on the sit-to-stand (STS) movement. Method: Rehab@home is composed of two Wii balance boards, a webcam and a computer, and it has two main software applications: one for patients to perform rehabilitation exercises and another one for therapists to visualize the data of the exercises. During the exercises, data from the boards and the webcam are processed in order to automatically assess the correctness of movements. Results: Rehab@home provides exercises for the rehabilitation of balance (in sitting and in standing positions), and for the execution of the STS movement. It gives automatic feedback to the patient and data are saved for future analysis. The therapist is able to adapt the difficulty of the exercises to match with each patient's needs. A preliminary study with seven patients was conducted for evaluating their feedback. They appreciated using the system and felt the exercises more engaging than conventional therapy. Conclusions: Feedback from patients gives the hope that Rehab@home can become a great tool for complementing their rehabilitation process.
2014
Authors
Rocha, R; Silva, J; Campilho, A;
Publication
COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE
Abstract
A new approach is introduced for the automatic detection of the lumen axis of the common carotid artery in B-mode ultrasound images. The image is smoothed using a Gaussian filter and then a dynamic programming scheme extracts the dominant paths of local minima of the intensity and the dominant paths of local maxima of the gradient magnitude with the gradient pointing downwards. Since these paths are possible estimates of the lumen axis and the far wall of a blood vessel, respectively, they are grouped together into pairs. Then, a pattern of two features is computed from each pair of paths and used as input to a linear discriminant classifier in order to select the pair of paths that correspond to the common carotid artery. The estimated lumen axis is the path of local minima of the intensity that belongs to the selected pair of paths. The proposed method is suited to real time processing, no user interaction is required and the number of parameters is minimal and easy to determine. The validation was performed using two datasets, with a total of 199 images, and has shown a success rate of 99.5% (100% if only the carotid regions for which a ground truth is available are considered). The datasets have a large diversity of images, including cases of arteries with plaque and images with heavy noise, text or other graphical markings inside the artery region.
2017
Authors
Araujo, T; Aresta, G; Castro, E; Rouco, J; Aguiar, P; Eloy, C; Polonia, A; Campilho, A;
Publication
PLOS ONE
Abstract
Breast cancer is one of the main causes of cancer death worldwide. The diagnosis of biopsy tissue with hematoxylin and eosin stained images is non-trivial and specialists often disagree on the final diagnosis. Computer-aided Diagnosis systems contribute to reduce the cost and increase the efficiency of this process. Conventional classification approaches rely on feature extraction methods designed for a specific problem based on field-knowledge. To overcome the many difficulties of the feature-based approaches, deep learning methods are becoming important alternatives. A method for the classification of hematoxylin and eosin stained breast biopsy images using Convolutional Neural Networks (CNNs) is proposed. Images are classified in four classes, normal tissue, benign lesion, in situ carcinoma and invasive carcinoma, and in two classes, carcinoma and non-carcinoma. The architecture of the network is designed to retrieve information at different scales, including both nuclei and overall tissue organization. This design allows the extension of the proposed system to whole-slide histology images. The features extracted by the CNN are also used for training a Support Vector Machine classifier. Accuracies of 77.8% for four class and 83.3% for carcinoma/non-carcinoma are achieved. The sensitivity of our method for cancer cases is 95.6%.
2017
Authors
Meyer, MI; Costa, P; Galdran, A; Mendonça, AM; Campilho, A;
Publication
IMAGE ANALYSIS AND RECOGNITION, ICIAR 2017
Abstract
Retinal vessel segmentation is a fundamental and well-studied problem in the retinal image analysis field. The standard images in this context are color photographs acquired with standard fundus cameras. Several vessel segmentation techniques have been proposed in the literature that perform successfully on this class of images. However, for other retinal imaging modalities, blood vessel extraction has not been thoroughly explored. In this paper, we propose a vessel segmentation technique for Scanning Laser Opthalmoscopy (SLO) retinal images. Our method adapts a Deep Neural Network (DNN) architecture initially devised for segmentation of biological images (U-Net), to perform the task of vessel segmentation. The model was trained on a recent public dataset of SLO images. Results show that our approach efficiently segments the vessel network, achieving a performance that outperforms the current state-of-the-art on this particular class of images. © Springer International Publishing AG 2017.
2017
Authors
Araujo, T; Aresta, G; Almada Lobo, B; Mendonca, AM; Campilho, A;
Publication
IMAGE ANALYSIS AND RECOGNITION, ICIAR 2017
Abstract
An unsupervised method for convolutional neural network (CNN) architecture design is proposed. The method relies on a variable neighborhood search-based approach for finding CNN architectures and hyperparameter values that improve classification performance. For this purpose, t-Distributed Stochastic Neighbor Embedding (t-SNE) is applied to effectively represent the solution space in 2D. Then, k-Means clustering divides this representation space having in account the relative distance between neighbors. The algorithm is tested in the CIFAR-10 image dataset. The obtained solution improves the CNN validation loss by over 15% and the respective accuracy by 5%. Moreover, the network shows higher predictive power and robustness, validating our method for the optimization of CNN design.
2017
Authors
Remeseiro, B; Mendonca, AM; Campilho, A;
Publication
2017 INTERNATIONAL JOINT CONFERENCE ON NEURAL NETWORKS (IJCNN)
Abstract
Image quality assessment has been a topic of intense research over the last decades. Although its application to other disciplines is growing tremendously, its use in retinal imaging is still immature and some fundamental challenges remain unsolved. Thus, we present a research methodology for the objective assessment of the quality in retinal images. The methodology can be used as a preliminary step in any computer-aided system, and is composed of four main steps: the location of the region-of-interest, the extraction of relevant image properties and their analysis by feature selection, and the final binary classification into two classes (good and poor quality). The experimental results demonstrate the adequacy of the proposed methodology in this context, being able to objectively assess the quality of retinal images with an accuracy over 99%.
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