2020
Authors
Padua, L; Marques, P; Martins, L; Sousa, A; Peres, E; Sousa, JJ;
Publication
REMOTE SENSING
Abstract
Phytosanitary conditions can hamper the normal development of trees and significantly impact their yield. The phytosanitary condition of chestnut stands is usually evaluated by sampling trees followed by a statistical extrapolation process, making it a challenging task, as it is labor-intensive and requires skill. In this study, a novel methodology that enables multi-temporal analysis of chestnut stands using multispectral imagery acquired from unmanned aerial vehicles is presented. Data were collected in different flight campaigns along with field surveys to identify the phytosanitary issues affecting each tree. A random forest classifier was trained with sections of each tree crown using vegetation indices and spectral bands. These were first categorized into two classes: (i) absence or (ii) presence of phytosanitary issues. Subsequently, the class with phytosanitary issues was used to identify and classify either biotic or abiotic factors. The comparison between the classification results, obtained by the presented methodology, with ground-truth data, allowed us to conclude that phytosanitary problems were detected with an accuracy rate between 86% and 91%. As for determining the specific phytosanitary issue, rates between 80% and 85% were achieved. Higher accuracy rates were attained in the last flight campaigns, the stage when symptoms are more prevalent. The proposed methodology proved to be effective in automatically detecting and classifying phytosanitary issues in chestnut trees throughout the growing season. Moreover, it is also able to identify decline or expansion situations. It may be of help as part of decision support systems that further improve on the efficient and sustainable management practices of chestnut stands.
2020
Authors
Padua, L; Marques, P; Martins, L; Sousa, A; Peres, E; Sousa, JJ;
Publication
IGARSS 2020 - 2020 IEEE INTERNATIONAL GEOSCIENCE AND REMOTE SENSING SYMPOSIUM
Abstract
Individual tree segmentation is a challenging task due to the labour-intensive and time-consuming work required. Remote sensing data acquired from sensors coupled in unmanned aerial vehicles (UAV) constitutes a viable alternative to provide a quicker data acquisition, covering broader areas in a shorter period of time. This study aims to use UAV-based multispectral imagery to automatically identify individual trees in a chestnut stand. Tree parameters were estimated allowing its characterization. The leaf area index (LAI) was measured and was correlated with the estimated parameters. A good correlation was found for NDVI (R-2 = 0.76), while this relationship was less evident in the tree crown area and tree height. This way, our results indicate that the use of UAV-based multispectral imagery is a quick and reliable way to determine canopy structural parameters and LAI of chestnut trees.
2020
Authors
Moura Alves, M; Gouveia, AR; de Almeida, JMMM; Monteiro Silva, F; Silva, JA; Saraiva, C;
Publication
LWT-FOOD SCIENCE AND TECHNOLOGY
Abstract
This study aims to evaluate the effect of Salvia officinalis L. (sage) essential oil (EO) on behavior of L. monocytogenes ATCC679 inoculated in beef processed by Sous-vide cook-chill (SVCC) and stored at 2 or 8 degrees C during 28 days. Minimum inhibitory concentration (MIC) of L. monocytogenes was obtained with 31.3 mu L/mL of EO. D values were determined for samples with EO (21'39 '') and without EO (21'17 ''). Beef samples were inoculated with L. monocytogenes at a concentration of 1 x 108 CFU/mL and vacuum-packed after EO addition at MIC value. Three heat treatments (F) were applied to reduce 1-log10 (F1), 2-log10 (F2) and 3-log10 (F3). EO composition was identified by gas-chromatography mass-spectrometry analysis. The main compounds identified were beta-pinene (11.70%), camphor (8.21%), beta-thujene (7.82%), 1.8-cineole (5.19%), alpha-humulene (6.07%) and endoborneol (4.87%).A reduction of approximately 1 log (CFU/g) of L. monocytogenes was observed in EO samples, compared to control samples at 2 degrees C. At 8 degrees C, despite exponential development from day 14, lower L. monocytogenes counts were observed in EO samples. Data showed that sage EO can help to control L. monocytogenes growth. However a possibility of using sage as a natural preservative, must be combined with other agents to control microbial growth more effectively.
2020
Authors
Guimaraes, N; Padua, L; Marques, P; Silva, N; Peres, E; Sousa, JJ;
Publication
REMOTE SENSING
Abstract
Currently, climate change poses a global threat, which may compromise the sustainability of agriculture, forestry and other land surface systems. In a changing world scenario, the economic importance of Remote Sensing (RS) to monitor forests and agricultural resources is imperative to the development of agroforestry systems. Traditional RS technologies encompass satellite and manned aircraft platforms. These platforms are continuously improving in terms of spatial, spectral, and temporal resolutions. The high spatial and temporal resolutions, flexibility and lower operational costs make Unmanned Aerial Vehicles (UAVs) a good alternative to traditional RS platforms. In the management process of forests resources, UAVs are one of the most suitable options to consider, mainly due to: (1) low operational costs and high-intensity data collection; (2) its capacity to host a wide range of sensors that could be adapted to be task-oriented; (3) its ability to plan data acquisition campaigns, avoiding inadequate weather conditions and providing data availability on-demand; and (4) the possibility to be used in real-time operations. This review aims to present the most significant UAV applications in forestry, identifying the appropriate sensors to be used in each situation as well as the data processing techniques commonly implemented.
2020
Authors
Jurado, JM; Padua, L; Feito, FR; Sousa, JJ;
Publication
REMOTE SENSING
Abstract
The optimisation of vineyards management requires efficient and automated methods able to identify individual plants. In the last few years, Unmanned Aerial Vehicles (UAVs) have become one of the main sources of remote sensing information for Precision Viticulture (PV) applications. In fact, high resolution UAV-based imagery offers a unique capability for modelling plant's structure making possible the recognition of significant geometrical features in photogrammetric point clouds. Despite the proliferation of innovative technologies in viticulture, the identification of individual grapevines relies on image-based segmentation techniques. In that way, grapevine and non-grapevine features are separated and individual plants are estimated usually considering a fixed distance between them. In this study, an automatic method for grapevine trunk detection, using 3D point cloud data, is presented. The proposed method focuses on the recognition of key geometrical parameters to ensure the existence of every plant in the 3D model. The method was tested in different commercial vineyards and to push it to its limit a vineyard characterised by several missing plants along the vine rows, irregular distances between plants and occluded trunks by dense vegetation in some areas, was also used. The proposed method represents a disruption in relation to the state of the art, and is able to identify individual trunks, posts and missing plants based on the interpretation and analysis of a 3D point cloud. Moreover, a validation process was carried out allowing concluding that the method has a high performance, especially when it is applied to 3D point clouds generated in phases in which the leaves are not yet very dense (January to May). However, if correct flight parametrizations are set, the method remains effective throughout the entire vegetative cycle.
2020
Authors
Guimaraes, N; Padua, L; Adao, T; Hruska, J; Peres, E; Sousa, JJ;
Publication
ISPRS INTERNATIONAL JOURNAL OF GEO-INFORMATION
Abstract
Currently, the use of free and open-source software is increasing. The flexibility, availability, and maturity of this software could be a key driver to develop useful and interesting solutions. In general, open-source solutions solve specific tasks that can replace commercial solutions, which are often very expensive. This is even more noticeable in areas requiring analysis and manipulation/visualization of a large volume of data. Considering that there is a major gap in the development of web applications for photogrammetric processing, based on open-source technologies that offer quality results, the application presented in this article is intended to explore this niche. Thus, in this article a solution for photogrammetric processing is presented, based on the integration of MicMac, GeoServer, Leaflet, and Potree software. The implemented architecture, focusing on open-source software for data processing and for graphical manipulation, visualization, measuring, and analysis, is presented in detail. To assess the results produced by the proposed web application, a case study is presented, using imagery acquired from an unmanned aerial vehicle in two different areas.
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