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Publications

2024

A Distributed Computing Solution for Privacy-Preserving Genome-Wide Association Studies

Authors
Brito, C; Ferreira, P; Paulo, J;

Publication

Abstract
AbstractBreakthroughs in sequencing technologies led to an exponential growth of genomic data, providing unprecedented biological in-sights and new therapeutic applications. However, analyzing such large amounts of sensitive data raises key concerns regarding data privacy, specifically when the information is outsourced to third-party infrastructures for data storage and processing (e.g., cloud computing). Current solutions for data privacy protection resort to centralized designs or cryptographic primitives that impose considerable computational overheads, limiting their applicability to large-scale genomic analysis.We introduce Gyosa, a secure and privacy-preserving distributed genomic analysis solution. Unlike in previous work, Gyosafollows a distributed processing design that enables handling larger amounts of genomic data in a scalable and efficient fashion. Further, by leveraging trusted execution environments (TEEs), namely Intel SGX, Gyosaallows users to confidentially delegate their GWAS analysis to untrusted third-party infrastructures. To overcome the memory limitations of SGX, we implement a computation partitioning scheme within Gyosa. This scheme reduces the number of operations done inside the TEEs while safeguarding the users’ genomic data privacy. By integrating this security scheme inGlow, Gyosaprovides a secure and distributed environment that facilitates diverse GWAS studies. The experimental evaluation validates the applicability and scalability of Gyosa, reinforcing its ability to provide enhanced security guarantees. Further, the results show that, by distributing GWASes computations, one can achieve a practical and usable privacy-preserving solution.

2024

Deep Learning-Based Hip Detection in Pelvic Radiographs

Authors
Loureiro, C; Filipe, V; Franco-Gonçalo, P; Pereira, AI; Colaço, B; Alves-Pimenta, S; Ginja, M; Gonçalves, L;

Publication
OPTIMIZATION, LEARNING ALGORITHMS AND APPLICATIONS, PT II, OL2A 2023

Abstract
Radiography is the primary modality for diagnosing canine hip dysplasia (CHD), with visual assessment of radiographic features sometimes used for accurate diagnosis. However, these features typically constitute small regions of interest (ROI) within the overall image, yet they hold vital diagnostic information and are crucial for pathological analysis. Consequently, automated detection of ROIs becomes a critical preprocessing step in classification or segmentation systems. By correctly extracting the ROIs, the efficiency of retrieval and identification of pathological signs can be significantly improved. In this research study, we employed the most recent iteration of the YOLO (version 8) model to detect hip joints in a dataset of 133 pelvic radiographs. The best-performing model achieved a mean average precision (mAP50:95) of 0.81, indicating highly accurate detection of hip regions. Importantly, this model displayed feasibility for training on a relatively small dataset and exhibited promising potential for various medical applications.

2024

Calibration and Modeling of the Semmes-Weinstein Monofilament for Diabetic Foot Management

Authors
Castro-Martins, P; Pinto-Coelho, L; Campilho, RDSG;

Publication
BIOENGINEERING-BASEL

Abstract
Diabetic foot is a serious complication that poses significant risks for diabetic patients. The resulting reduction in protective sensitivity in the plantar region requires early detection to prevent ulceration and ultimately amputation. The primary method employed for evaluating this sensitivity loss is the 10 gf Semmes-Weinstein monofilament test, commonly used as a first-line procedure. However, the lack of calibration in existing devices often introduces decision errors due to unreliable feedback. In this article, the mechanical behavior of a monofilament was analytically modeled, seeking to promote awareness of the impact of different factors on clinical decisions. Furthermore, a new device for the automation of the metrological evaluation of the monofilament is described. Specific testing methodologies, used for the proposed equipment, are also described, creating a solid base for the establishment of future calibration guidelines. The obtained results showed that the tested monofilaments had a very high error compared to the 10 gf declared by the manufacturers. To improve the precision and reliability of assessing the sensitivity loss, the frequent metrological calibration of the monofilament is crucial. The integration of automated verification, simulation capabilities, and precise measurements shows great promise for diabetic patients, reducing the likelihood of adverse outcomes.

2024

Flow Correlation Attacks on Tor Onion Service Sessions with Sliding Subset Sum

Authors
Lopes, D; Dong, JD; Medeiros, P; Castro, D; Barradas, D; Portela, B; Vinagre, J; Ferreira, B; Christin, N; Santos, N;

Publication
31st Annual Network and Distributed System Security Symposium, NDSS 2024, San Diego, California, USA, February 26 - March 1, 2024

Abstract

2024

The Role of Batteries in Maximizing Green Hydrogen Production with Power Flow Tracing

Authors
Dudkina E.; Villar J.; Bessa R.J.; Crisostomi E.;

Publication
4th International Conference on Smart Grid and Renewable Energy, SGRE 2024 - Proceedings

Abstract
Hydrogen is currently getting more and more attention in the European climate strategy as a promising enabling technology to decarbonize industry, transport sector and to provide a long-term, high-capacity energy storage solution. However, to truly contribute to the reduction of CO2 emissions, hydrogen must be produced respecting a principle of additionality, to ensure that it is produced using renewable energy sources and that its production does not decrease the green energy supplied to other loads. This study tracks the share of renewables generation in the energy mix used to produce hydrogen by applying a power flow tracing technique integrated with an optimal power flow analysis. This method allows the minimization of the system operation costs, while maximizing the green hydrogen production and considering the additionality principle. The system cost function is also modified to include the sizing and allocation of conventional batteries in the grid, and assess their ability to further increase the share of green energy in hydrogen production.

2024

Points of interest in the city of Barcelos in Portugal through augmented reality

Authors
Pereira M.; Silva J.C.; Pinheiro M.; Carvalho S.; Santos G.;

Publication
Internet of Things and Cyber-Physical Systems

Abstract
Barcelos is a historic city in Portugal with many tourist attractions, attracting more and more visitors who come to the city with the aim of exploring it. The main objective of this article is to boost tourism in the city of Barcelos, specifically highlighting tourist, historical and leisure spots, based on the development of a mobile application using augmented reality technologies and geolocation. This application intends to allow the users to know historical points of interest in Barcelos, as well as interact with a certain point. The results of this investigation were evaluated by testing the application by end users, with the aim of identifying whether the application meets their needs, in particular the promotion of tourist and historical points.

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