2021
Autores
Rocha J.; Mendonça A.M.; Campilho A.;
Publicação
U.Porto Journal of Engineering
Abstract
Backed by more powerful computational resources and optimized training routines, Deep Learning models have proven unprecedented performance and several benefits to extract information from chest X-ray data. This is one of the most common imaging exams, whose increasing demand is reflected in the aggravated radiologists’ workload. Consequently, healthcare would benefit from computer-aided diagnosis systems to prioritize certain exams and further identify possible pathologies. Pioneering work in chest X-ray analysis has focused on the identification of specific diseases, but to the best of the authors’ knowledge no paper has specifically reviewed relevant work on abnormality detection and multi-label thoracic pathology classification. This paper focuses on those issues, selecting the leading chest X-ray based deep learning strategies for comparison. In addition, the paper discloses the current annotated public chest X-ray databases, covering the common thorax diseases.
2021
Autores
Zhao, D; Ferdian, E; Maso Talou, G; Quill, G; Gilbert, K; Babarenda Gamage, T; Wang, V; Pedrosa, J; D"hooge, J; Legget, M; Ruygrok, P; Doughty, R; Camara, O; Young, A; Nash, M;
Publicação
European Heart Journal - Cardiovascular Imaging
Abstract
2021
Autores
Costa, P; Campilho, A; Cardoso, JS;
Publicação
Progress in Pattern Recognition, Image Analysis, Computer Vision, and Applications - 25th Iberoamerican Congress, CIARP 2021, Porto, Portugal, May 10-13, 2021, Revised Selected Papers
Abstract
Cancer is a leading cause of death worldwide. The detection and diagnosis of most cancers are confirmed by a tissue biopsy that is analyzed via the optic microscope. These samples are then scanned to giga-pixel sized images for further digital processing by pathologists. An automated method to segment the malignant regions of these images could be of great interest to detect cancer earlier and increase the agreement between specialists. However, annotating these giga-pixel images is very expensive, time-consuming and error-prone. We evaluate 4 existing annotation efficient methods, including transfer learning and self-supervised learning approaches. The best performing approach was to pretrain a model to colourize a grayscale histopathological image and then finetune that model on a dataset with manually annotated examples. This method was able to improve the Intersection over Union from 0.2702 to 0.3702.
2021
Autores
Martins, C; da Silva, JM; Guimaraes, D; Martins, L; Da Silva, MV;
Publicação
REVISTA PORTUGUESA DE CARDIOLOGIA
Abstract
Introduction: Heart failure (HF) represents a huge financial and economic burden worldwide. Some authors advocate that remote monitoring should be implemented to improve HF management, but given its increasing incidence, as well as its morbidity and mortality, a question still remains: are we monitoring it properly? There is no shortage of literature on home monitoring devices, however, most of them are designed to monitor an unsuitable array of variables and, to the best of our knowledge, there are no large randomized studies about their impact on morbidity/mortality of HF patients. Objective: Description of a novel monitoring device. Methods: As a solution, we designed MONITORIA (MOnitoring NonInvasively To Overcome mortality Rates of heart Insufficiency on Ambulatory). Results: This is a multimodal device that will provide real time monitoring of vital, electrophysiological, hemodynamic and chemical signs, transthoracic impedance, and physical activity levels. The device is meant to perform continuous analysis and transmission of all data. Significant alterations in a patient's variable will alert the attending physician and, in case of potentially life-threatening situations, the national emergency medical system. The MONITORIA device will, also, have a function that sends shocks or functions as a pacemaker to treat certain arrhythmias/blockades. This function can be activated the very first time the patient utilizes it, based on their risk of sudden cardiac death. Discussion/Conclusions: MONITORIA is a promising device mostly because it is included in a follow-up program that takes into account a multi-perspective feature of HF development and is based on the real world patient, adapting innovations not to the disease but rather to the patients. (C) 2021 Sociedade Portuguesa de Cardiologia. Published by Elsevier Espana, S.L.U.
2021
Autores
Petrescu, A; Cvijic, M; Bezy, S; Santos, P; Duchenne, J; Orlowska, M; Pedrosa, J; Degtiarova, G; Van Keer, J; Von Bardeleben, S; Droogne, W; Van Cleemput, J; Bogaert, J; D"hooge, J; Voigt, J;
Publicação
European Heart Journal - Cardiovascular Imaging
Abstract
2021
Autores
Pinto, H; Pernice, R; Amado, C; Silva, ME; Javorka, M; Faes, L; Rocha, AP;
Publicação
2021 43RD ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE & BIOLOGY SOCIETY (EMBC)
Abstract
Heart Period (H) results from the activity of several coexisting control mechanisms, involving Systolic Arterial Pressure (S) and Respiration (R), which operate across multiple time scales encompassing not only short-term dynamics but also long-range correlations. In this work, multiscale representation of Transfer Entropy (TE) and of its decomposition in the network of these three interacting processes is obtained by extending the multivariate approach based on linear parametric VAR models to the Vector AutoRegressive Fractionally Integrated (VARFI) framework for Gaussian processes. This approach allows to dissect the different contributions to cardiac dynamics accounting for the simultaneous presence of short and long term dynamics. The proposed method is first tested on simulations of a benchmark VARFI model and then applied to experimental data consisting of H, S and R time series measured in healthy subjects monitored at rest and during mental and postural stress. The results reveal that the proposed method can highlight the dependence of the information transfer on the balance between short-term and long-range correlations in coupled dynamical systems.
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