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Publicações

Publicações por Aurélio Campilho

2012

Distance Measures for Image Segmentation Evaluation

Autores
Monteiro, FC; Campilho, AC;

Publicação
NUMERICAL ANALYSIS AND APPLIED MATHEMATICS (ICNAAM 2012), VOLS A AND B

Abstract
In this paper we present a study of evaluation measures that enable the quantification of the quality of an image segmentation result. Despite significant advances in image segmentation techniques, evaluation of these techniques thus far has been largely subjective. Typically, the effectiveness of a new algorithm is demonstrated only by the presentation of a few segmented images and is otherwise left to subjective evaluation by the reader. Such an evaluation criterion can be useful for different applications: the comparison of segmentation results, the automatic choice of the best fitted parameters of a segmentation method for a given image, or the definition of new segmentation methods by optimization. We first present the state of art of distance evaluation measures, and then, we compare several evaluation criteria.

2001

On combining classifiers using sum and product rules

Autores
Alexandre, LA; Campilho, AC; Kamel, M;

Publicação
PATTERN RECOGNITION LETTERS

Abstract
This paper presents a comparative study of the performance of arithmetic and geometric means as rules to combine multiple classifiers. For problems with two classes., we prove that these combination rules are equivalent when using two classifiers and the sum of the estimates of the a posteriori probabilities is equal to one. We also prove that the case of a two class problem and a combination of two classifiers is the only one where such equivalence occurs. We present experiments illustrating the equivalence of the rules under the above mentioned assumptions.

2010

Segmentation of the carotid intima-media region in B-mode ultrasound images

Autores
Rocha, R; Campilho, A; Silva, J; Azevedo, E; Santos, R;

Publicação
IMAGE AND VISION COMPUTING

Abstract
This paper proposes a new approach for the segmentation of both near-end and far-end intima-media regions of the common carotid artery in ultrasound images. The method requires minimal user interaction and is able to segment the near-end wall in arteries with large, hypoechogenic and irregular plaques, issues usually not considered previously due to the increased segmentation difficulty. The adventitia is detected by searching for the best fit of a cubic spline to edges having features compatible with the adventitia boundary. The algorithm uses a global smoothness constraint and integrates discriminating features of the adventitia to reduce the attraction by other edges. Afterwards, using the information of the adventitia location, the lumen boundary is detected by combining dynamic programming, smooth intensity thresholding surfaces and geometric snakes. Smooth contours that correctly adapt to the intima are produced, even in the presence of deep concavities. Moreover, unlike balloon-based snakes, the propagation force does not depend on gradients and does not require a predefined direction. An extensive statistical evaluation is computed, using a set of 47 images from 24 different symptomatic patients, including several classes, sizes and shapes of plaques. Bland-Altman plots of the mean intima-media thickness, for manual segmentations of two medical experts, show a high intra-observer and inter-observer agreement, with mean differences close to zero (mean between -0.10 mm and 0.18 mm) and with the large majority of differences within the limits of agreement (standard deviation between 0.10 mm and 0.12 mm). Similar Plots reveal it good agreement between the automatic and the manual segmentations (mean between -0.07 mm and 0.11 mm and standard deviation between 0.11 mm and 0.12 mm).

2009

Automated Arabidopsis plant root cell segmentation based on SVM classification and region merging

Autores
Marcuzzo, M; Quelhas, P; Campilho, A; Mendonca, AM; Campilho, A;

Publicação
COMPUTERS IN BIOLOGY AND MEDICINE

Abstract
To obtain development information of individual plant cells, it is necessary to perform in vivo imaging of the specimen under study, through time-lapse confocal microscopy. Automation of cell detection/marking process is important to provide research tools in order to ease the search for special events, such as cell division. In this paper we discuss an automatic cell detection approach for Arabidopsis thaliana based on segmentation, which selects the best cell candidates from a starting watershed-based image segmentation and improves the result by merging adjacent regions. The selection of individual cells is obtained using a support vector machine (SVM) classifier, based on a cell descriptor constructed from the shape and edge strength of the cells' contour. In addition we proposed a novel cell merging criterion based on edge strength along the line that connects adjacent cells' centroids, which is a valuable tool in the reduction of cell over-segmentation. The result is largely pruned of badly segmented and over-segmented cells, thus facilitating the study of cells. When comparing the results after merging with the basic watershed segmentation, we obtain 1.5% better coverage (increase in F-measure) and up to 27% better precision in correct cell segmentation.

2011

Segmentation of ultrasound images of the carotid using RANSAC and cubic splines

Autores
Rocha, R; Campilho, A; Silva, J; Azevedo, E; Santos, R;

Publicação
COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE

Abstract
A new algorithm is proposed for the semi-automatic segmentation of the near-end and the far-end adventitia boundary of the common carotid artery in ultrasound images. It uses the random sample consensus method to estimate the most significant cubic splines fitting the edge map of a longitudinal section. The consensus of the geometric model (a spline) is evaluated through a new gain function, which integrates the responses to different discriminating features of the carotid boundary: the proximity of the geometric model to any edge or to valley shaped edges; the consistency between the orientation of the normal to the geometric model and the intensity gradient; and the distance to a rough estimate of the lumen boundary. A set of 50 longitudinal B-mode images of the common carotid and their manual segmentations performed by two medical experts were used to assess the performance of the method. The image set was taken from 25 different subjects, most of them having plaques of different classes (class II to class IV), sizes and shapes. The quantitative evaluation showed promising results, having detection errors similar to the ones observed in manual segmentations for 95% of the far-end boundaries and 73% of the near-end boundaries.

2012

Automatic segmentation of carotid B-mode images using fuzzy classification

Autores
Rocha, R; Silva, J; Campilho, A;

Publicação
MEDICAL & BIOLOGICAL ENGINEERING & COMPUTING

Abstract
This paper presents a new method for the automatic segmentation of the common carotid artery in B-mode images. This method uses the instantaneous coefficient of variation edge detector, fuzzy classification of edges and dynamic programming. Several discriminating features of the intima and adventitia boundaries are considered, like the edge strength, the intensity gradient orientation, the valley shaped intensity profile and contextual information of the region delimited by those boundaries. The adopted fuzzy classification of edges helps avoiding low-pass filtering. The method is suited to real-time processing and user interaction is not required. Both the near and far wall boundaries can be detected in arteries with plaques of different types and sizes. Both expert manual and automatic tracings are significantly better for the far wall, due to the better visibility of the intima and adventitia boundaries. The automatic detection of the far wall shows an accuracy similar to the manual detections. For this wall, the error coefficient of variation for the mean intima-media thickness is in the range [5.6, 6.6 %] for automatic detections and in [6.7, 7.1 %] for manual ones. In the case of the near wall, the same coefficient of variation is in [11.2, 13.0 %] for automatic detections and in [5.9, 9.0 %] for manual detections. The mean intima-media thickness measurement errors observed for the far wall ([0.15; 0.17] mm, [1.7; 1.9] pixel) are among the best values reported for other fully automatic approaches. The application of this approach in clinical practice is encouraged by the results for the far wall and the short processing time (mean of 2.1 s per image).

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