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Publicações

2024

Digital quantum simulation of non-perturbative dynamics of open systems with orthogonal polynomials

Autores
Guimaraes, JD; Vasilevskiy, MI; Barbosa, LS;

Publicação
QUANTUM

Abstract
Classical non-perturbative simulations of open quantum systems' dynamics face several scalability problems, namely, exponential scaling of the computational effort as a function of either the time length of the simulation or the size of the open system. In this work, we propose the use of the Time Evolving Density operator with Orthogonal Polynomials Algorithm (TEDOPA) on a quantum computer, which we term as Quantum TEDOPA (Q-TEDOPA), to simulate nonperturbative dynamics of open quantum systems linearly coupled to a bosonic environment (continuous phonon bath). By performing a change of basis of the Hamiltonian, the TEDOPA yields a chain of harmonic oscillators with only local nearestneighbour interactions, making this algorithm suitable for implementation on quantum devices with limited qubit connectivity such as superconducting quantum processors. We analyse in detail the implementation of the TEDOPA on a quantum device and show that exponential scalings of computational resources can potentially be avoided for time-evolution simulations of the systems considered in this work. We applied the proposed method to the simulation of the exciton transport between two light-harvesting molecules in the regime of moderate coupling strength to a non-Markovian harmonic oscillator environment on an IBMQ device. Applications of the Q-TEDOPA span problems which can not be solved by perturbation techniques belonging to different areas, such as the dynamics of quantum biological systems and strongly correlated condensed matter systems.

2024

Public policies to foster green hydrogen seasonal storage: Portuguese study case model until 2040

Autores
Santos, BH; Lopes, JP; Carvalho, L; Matos, M; Alves, I;

Publicação
ENERGY STRATEGY REVIEWS

Abstract
Portugal made a climate commitment when it ratified the Paris Climate Agreement in 2015. As a result, Portugal, along with other EU members, has created a national roadmap for the deployment of hydrogen as a crucial component of Portugal ' s energy transition towards carbon neutrality, creating synergies between the electric and gas systems. The increased variability of generation from variable renewable power sources will create challenges regarding the security of supply, requiring investment in storage solutions to minimize renewable energy curtailment and to provide dispatchability to the electric power system. Hydrogen can be a renewable energy carrier capable of ensuring not only the desired transformation of the infrastructures of the gas system but also an integrator of the Electric System, such as in Power -to -Power (P2P) systems. Hydrogen can be produced with a surplus of renewable electricity from wind and solar, allowing a long-term energy seasonal storage strategy, namely by using underground salt caverns, to be subsequently transformed into electricity when demand cannot be supplied due to a shortage of renewable generation from solar or wind. P2P investments are capital intensive and require the development of transitional regulation mechanisms to both create opportunities to market agents while fostering the energy surplus valuation and decreasing the energy dependency. In order to maintain the electric system ' s security of supply, the suggested methodology innovatively manages the importance of seasonal storage of renewable energy surplus using hydrogen in power systems. It suggests a novel set of regulatory strategies to foster the creation of a P2P solution that maintains generation adequacy while assisting in decarbonising the electric power industry. Such methodology combines long-term adequacy assessment with regulatory framework evaluation to evaluate the cost of the proposed solutions to the energy system. A case study based on the Portuguese power system outlook between 2030 and 2040 demonstrates that the considerable renewable energy surplus can be stored as hydrogen and converted back into electricity to assure adequate security of supply levels throughout the year with economic feasibility under distinct public policy models.

2024

An interpretable machine learning system for colorectal cancer diagnosis from pathology slides

Autores
Neto, PC; Montezuma, D; Oliveira, SP; Oliveira, D; Fraga, J; Monteiro, A; Monteiro, J; Ribeiro, L; Gonçalves, S; Reinhard, S; Zlobec, I; Pinto, IM; Cardoso, JS;

Publicação
NPJ PRECISION ONCOLOGY

Abstract
Considering the profound transformation affecting pathology practice, we aimed to develop a scalable artificial intelligence (AI) system to diagnose colorectal cancer from whole-slide images (WSI). For this, we propose a deep learning (DL) system that learns from weak labels, a sampling strategy that reduces the number of training samples by a factor of six without compromising performance, an approach to leverage a small subset of fully annotated samples, and a prototype with explainable predictions, active learning features and parallelisation. Noting some problems in the literature, this study is conducted with one of the largest WSI colorectal samples dataset with approximately 10,500 WSIs. Of these samples, 900 are testing samples. Furthermore, the robustness of the proposed method is assessed with two additional external datasets (TCGA and PAIP) and a dataset of samples collected directly from the proposed prototype. Our proposed method predicts, for the patch-based tiles, a class based on the severity of the dysplasia and uses that information to classify the whole slide. It is trained with an interpretable mixed-supervision scheme to leverage the domain knowledge introduced by pathologists through spatial annotations. The mixed-supervision scheme allowed for an intelligent sampling strategy effectively evaluated in several different scenarios without compromising the performance. On the internal dataset, the method shows an accuracy of 93.44% and a sensitivity between positive (low-grade and high-grade dysplasia) and non-neoplastic samples of 0.996. On the external test samples varied with TCGA being the most challenging dataset with an overall accuracy of 84.91% and a sensitivity of 0.996.

2024

In-shoe plantar pressure measurement technologies for the diabetic foot: A systematic review

Autores
Castro Martins, P; Marques, A; Coelho, L; Vaz, M; Baptista, JS;

Publicação
HELIYON

Abstract
Introduction: Loss of cutaneous protective sensation and high plantar pressures increase the risk for diabetic foot patients. Trauma and ulceration are imminent threats, making assessment and monitoring essential. This systematic review aims to identify systems and technologies for measuring in -shoe plantar pressures, focusing on the at -risk diabetic foot population. Methods: A systematic search was conducted across four electronic databases (Scopus, Web of Science, PubMed, Oxford Journals) using PRISMA methodology, covering articles published in English from 1979 to 2024. Only studies addressing systems or sensors exclusively measuring plantar pressures inside the shoe were included. Results: A total of 87 studies using commercially available devices and 45 articles proposing new systems or sensors were reviewed. The prevailing market offerings consist mainly of instrumented insoles. Emerging technologies under development often feature configurations with four, six or eight resistive sensors strategically placed within removable insoles. Despite some variability due to the inherent heterogeneity of human gait, these devices assess plantar pressure, although they present significant differences between them in measurement results. Individuals with diabetic foot conditions appears exhibit elevated plantar pressures, with reported peak pressures reaching approximately 1000 kPa. The results also showed significant differences between the diabetic and non -diabetic groups. Conclusion: Instrumented insoles, particularly those incorporating resistive sensor technology, dominate the field. Systems employing eight sensors at critical locations represent a pragmatic approach, although market options extend to systems with up to 960 sensors. Differences between devices can be a critical factor in measurement and highlights the importance of individualized patient assessment using consistent measurement devices.

2024

Pondering the Ugly Underbelly, and Whether Images Are Real

Autores
Hill, RK; Baquero, C;

Publicação
Commun. ACM

Abstract
[No abstract available]

2024

Variation in monitoring: Glucose measurement in the ICU as a case study to preempt spurious correlations

Autores
Teotia, K; Jia, YR; Woite, NL; Celi, LA; Matos, J; Struja, T;

Publicação
JOURNAL OF BIOMEDICAL INFORMATICS

Abstract
Objective: Health inequities can be influenced by demographic factors such as race and ethnicity, proficiency in English, and biological sex. Disparities may manifest as differential likelihood of testing which correlates directly with the likelihood of an intervention to address an abnormal finding. Our retrospective observational study evaluated the presence of variation in glucose measurements in the Intensive Care Unit (ICU). Methods: Using the MIMIC-IV database (2008-2019), a single -center, academic referral hospital in Boston (USA), we identified adult patients meeting sepsis-3 criteria. Exclusion criteria were diabetic ketoacidosis, ICU length of stay under 1 day, and unknown race or ethnicity. We performed a logistic regression analysis to assess differential likelihoods of glucose measurements on day 1. A negative binomial regression was fitted to assess the frequency of subsequent glucose readings. Analyses were adjusted for relevant clinical confounders, and performed across three disparity proxy axes: race and ethnicity, sex, and English proficiency. Results: We studied 24,927 patients, of which 19.5% represented racial and ethnic minority groups, 42.4% were female, and 9.8% had limited English proficiency. No significant differences were found for glucose measurement on day 1 in the ICU. This pattern was consistent irrespective of the axis of analysis, i.e. race and ethnicity, sex, or English proficiency. Conversely, subsequent measurement frequency revealed potential disparities. Specifically, males (incidence rate ratio (IRR) 1.06, 95% confidence interval (CI) 1.01 - 1.21), patients who identify themselves as Hispanic (IRR 1.11, 95% CI 1.01 - 1.21), or Black (IRR 1.06, 95% CI 1.01 - 1.12), and patients being English proficient (IRR 1.08, 95% CI 1.01 - 1.15) had higher chances of subsequent glucose readings. Conclusion: We found disparities in ICU glucose measurements among patients with sepsis, albeit the magnitude was small. Variation in disease monitoring is a source of data bias that may lead to spurious correlations when modeling health data.

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