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Publicações

2025

CINDERELLA Clinical Trial (NCT05196269): Patient Engagement with an AI-based Healthcare Application for Enhancing Breast Cancer Locoregional Treatment Decisions- Preliminary Insights

Autores
Bonci, EA; Antunes, M; Bobowicz, M; Borsoi, L; Ciani, O; Cruz, HV; Di Micco, R; Ekman, M; Gentilini, O; Romariz, M; Gonçalves, T; Gouveia, P; Heil, J; Kabata, P; Kaidar Person, O; Martins, H; Mavioso, C; Mika, M; Oliveira, HP; Oprea, N; Pfob, A; Haik, J; Menes, T; Schinköthe, T; Silva, G; Cardoso, JS; Cardoso, MJ;

Publicação
BREAST

Abstract

2025

Automated Microservice Pattern Instance Detection Using Infrastructure-as-Code Artifacts and Large Language Models

Autores
Duarte, CE;

Publicação
2025 IEEE 22ND INTERNATIONAL CONFERENCE ON SOFTWARE ARCHITECTURE COMPANION, ICSA-C

Abstract
Documenting software architecture is essential to preserve architecture knowledge, even though it is frequently costly. Architecture pattern instances, including microservice pattern instances, provide important structural software information. Practitioners should document this information to prevent knowledge vaporization. However, architecture patterns may not be detectable by analyzing source code artifacts, requiring the analysis of other types of artifacts. Moreover, many existing pattern detection instance approaches are complex to extend. This article presents our ongoing PhD research, early experiments, and a prototype for a tool we call MicroPAD for automating the detection of microservice pattern instances. The prototype uses Large Language Models (LLMs) to analyze Infrastructure-as-Code (IaC) artifacts to aid detection, aiming to keep costs low and maximize the scope of detectable patterns. Early experiments ran the prototype thrice in 22 GitHub projects. We verified that 83% of the patterns that the prototype identified were in the project. The costs of detecting the pattern instances were minimal. These results indicate that the approach is likely viable and, by lowering the entry barrier to automating pattern instance detection, could help democratize developer access to this category of architecture knowledge. Finally, we present our overall research methodology, planned future work, and an overview of MicroPAD's potential industrial impact.

2025

Anatomically and Clinically Informed Deep Generative Model for Breast Surgery Outcome Prediction

Autores
Santos, J; Montenegro, H; Bonci, E; Cardoso, MJ; Cardoso, JS;

Publicação
Deep-Breath@MICCAI

Abstract
Breast cancer patients often face difficulties when choosing among diverse surgeries. To aid patients, this paper proposes ACID-GAN (Anatomically and Clinically Informed Deep Generative Adversarial Network), a conditional generative model for predicting post-operative breast cancer outcomes using deep learning. Built on Pix2Pix, the model incorporates clinical metadata, such as surgery type and cancer laterality, by introducing a dedicated encoder for semantic supervision. Further improvements include colour preservation and anatomically informed losses, as well as clinical supervision via segmentation and classification modules. Experiments on a private dataset demonstrate that the model produces realistic, context-aware predictions. The results demonstrate that the model presents a meaningful trade-off between generating precise, anatomically defined results and maintaining patient-specific appearance, such as skin tone and shape.

2025

Integrated Fleet Management of Mobile Robots for Enhancing Industrial Efficiency: A Case Study on Interoperability in Multi-Brand Environments Within the Automotive Sector

Autores
Lopes, D; Pereira, T; Gonçalves, A; Cunha, F; Lopes, F; Antunes, J; Santos, V; Coutinho, F; Barreiros, J; Duraes, J; Santos, P; Simoes, F; Ferreira, P; Freitas, EDCD; Trovao, JPF; Ferreira, JP; Ferreira, NMF;

Publicação
APPLIED SCIENCES-BASEL

Abstract
This paper presents the development of fleet management software for mobile robots, including AGV and AMR technologies, within the scope of a case study from the GreenAuto project. The system was designed to integrate position and status data from different robots, unifying this information into a single map. To achieve this, a web-based platform was developed to allow the simultaneous, real-time visualization of all robots in operation. However, the main challenge of this research lies in the heterogeneity of the fleet, which comprises robots of different makes and models from various manufacturers, each using distinct data formats. The proposed approach addresses this by facilitating fleet monitoring and management, ensuring a greater efficiency and coordination in the robot movement. The results demonstrate that the platform improves the traceability and operational supervision, promoting the optimized management of mobile robots. It is concluded that the proposed solution contributes to industrial automation by providing an intuitive and centralized interface, enabling future expansions for new functionalities and the integration with other emerging technologies. The proposed system demonstrated efficiency in updating and supervising operations, with an average latency of 120 ms for task status updates and an interface refresh rate of less than 1 s, enabling near real-time supervision and facilitating operational decision-making.

2025

A Two-Stage U-Net Framework for Interactive Segmentation of Lung Nodules in CT Scans

Autores
Fernandes, L; Pereira, T; Oliveira, HP;

Publicação
IEEE ACCESS

Abstract
Segmentation of lung nodules in CT images is an important step during the clinical evaluation of patients with lung cancer. Furthermore, early assessment of the cancer is crucial to increase the overall survival chances of patients with such disease, and the segmentation of lung nodules can help detect the cancer in its early stages. Consequently, there are many works in the literature that explore the use of neural networks for the segmentation of lung nodules. However, these frameworks tend to rely on accurate labelling of the nodule centre to then crop the input image. Although such works are able to achieve remarkable results, they do not take into account that the healthcare professional may fail to correctly label the centre of the nodule. Therefore, in this work, we propose a new framework based on the U-Net model that allows to correct such inaccuracies in an interactive fashion. It is composed of two U-Net models in cascade, where the first model is used to predict a rough estimation of the lung nodule location and the second model refines the generated segmentation mask. Our results show that the proposed framework is able to be more robust than the studied baselines. Furthermore, it is able to achieve state-of-the-art performance, reaching a Dice of 91.12% when trained and tested on the LIDC-IDRI public dataset.

2025

Advancing automated mineral identification through LIBS imaging for lithium-bearing mineral species

Autores
Capela, D; Lopes, T; Dias, F; Ferreira, MFS; Teixeira, J; Lima, A; Jorge, PAS; Silva, NA; Guimaraes, D;

Publicação
SPECTROCHIMICA ACTA PART B-ATOMIC SPECTROSCOPY

Abstract
Mineral identification is a challenging task in geological sciences, which often implies multiple analyses of the physical and chemical properties of the samples for an accurate result. This task is particularly critical for the mining industry, where proper and fast mineral identification may translate into major efficiency and performance gains, such as in the case of the lithium mining industry. In this study, a mineral identification algorithm optimized for analyzing lithium-bearing samples using Laser-induced breakdown spectroscopy (LIBS) imaging, is put to the test with a set of representative samples. The algorithm incorporates advanced spectral processing techniques-baseline removal, Gaussian filtering, and data normalization-alongside unsupervised clustering to generate interpretable classification maps and auxiliary charts. These enhancements facilitate rapid and precise labelling of mineral compositions, significantly improving the interpretability and interactivity of the user interface. Extensive testing on diverse mineral samples with varying complexities confirmed the algorithm's robustness and broad applicability. Challenges related to sample granulometry and LIBS resolution were identified, suggesting future directions for optimizing system resolution to enhance classification accuracy in complex mineral matrices. The integration of this advanced algorithm with LIBS technology holds the potential to accelerate the mineral evaluation, paving the way for more efficient and sustainable mineral exploration.

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